Variant report

Variant	rs562378741
Chromosome Location	chr10:25277469-25277470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:25277210..25278984-chr10:25279762..25281866,2	K562	blood:
2	chr10:25246877..25249016-chr10:25275912..25277898,2	K562	blood:
3	chr10:25241921..25243506-chr10:25276442..25278938,2	K562	blood:

Variant related genes	Relation type
ENSG00000273107	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3452797	chr10:25276796-25278244	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3452808	chr10:25276796-25278244	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv1965232	chr10:25277423-25277846	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25264400-25277600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr10:25264400-25277800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr10:25264400-25281800	Weak transcription	Fetal Intestine Small	intestine
4	chr10:25264600-25292200	Weak transcription	Ovary	ovary
5	chr10:25269200-25277800	Weak transcription	Brain Angular Gyrus	brain
6	chr10:25271200-25277800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr10:25272400-25277800	Weak transcription	Gastric	stomach
8	chr10:25272400-25281000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr10:25274200-25278200	Weak transcription	A549	lung
10	chr10:25274400-25277800	Weak transcription	Adipose Nuclei	Adipose
11	chr10:25275400-25278400	Enhancers	Brain Hippocampus Middle	brain
12	chr10:25276600-25277800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:25276600-25280400	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr10:25276800-25277800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr10:25276800-25277800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr10:25277000-25278200	Weak transcription	Hela-S3	cervix
17	chr10:25277200-25277600	Weak transcription	Brain Anterior Caudate	brain
18	chr10:25277200-25277600	Weak transcription	Brain Substantia Nigra	brain
19	chr10:25277400-25278400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr10:25277400-25278600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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