Variant report

Variant	rs562384118
Chromosome Location	chr7:80097576-80097577
allele	-/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:80096464..80097970-chr7:80098984..80101525,2	K562	blood:
2	chr7:80096594..80099585-chr7:80101660..80104577,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv831042	chr7:79984079-80122312	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1030961	chr7:80032525-80197468	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv538991	chr7:80032525-80197468	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv949205	chr7:80039695-80211200	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv888523	chr7:80088592-80142217	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv607680	chr7:80097576-80142217	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80094600-80098400	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr7:80095600-80097800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr7:80095600-80106800	Weak transcription	Right Atrium	heart
4	chr7:80096600-80101200	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr7:80096600-80102400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr7:80096800-80099400	Weak transcription	NH-A	brain
7	chr7:80096800-80101000	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr7:80096800-80101600	Weak transcription	Small Intestine	intestine
9	chr7:80096800-80102000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr7:80096800-80102000	Weak transcription	Liver	Liver
11	chr7:80096800-80102000	Weak transcription	HepG2	liver
12	chr7:80096800-80113000	Enhancers	Hela-S3	cervix
13	chr7:80097000-80097800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr7:80097000-80099000	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr7:80097000-80101000	Weak transcription	Adipose Nuclei	Adipose
16	chr7:80097000-80101400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr7:80097200-80100800	Weak transcription	Duodenum Mucosa	Duodenum
18	chr7:80097200-80100800	Weak transcription	Fetal Intestine Large	intestine
19	chr7:80097200-80101000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr7:80097200-80101000	Weak transcription	Fetal Heart	heart
21	chr7:80097200-80101600	Weak transcription	A549	lung
22	chr7:80097400-80100800	Weak transcription	Fetal Intestine Small	intestine

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