The 2.0 version of rSNPBase

Variant report

Variant rs562391016
Chromosome Location chr19:38621186-38621187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38591800-38642800 Weak transcription Small Intestine intestine
2 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
3 chr19:38603000-38625400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr19:38605800-38625400 Weak transcription HMEC breast
5 chr19:38610800-38643600 Weak transcription HepG2 liver
6 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:38611200-38625400 Weak transcription NHEK skin
8 chr19:38611600-38621400 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:38611600-38625400 Weak transcription Fetal Heart heart
10 chr19:38611600-38626000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:38611600-38634400 Weak transcription Stomach Mucosa stomach
12 chr19:38611600-38634800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr19:38611600-38634800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr19:38611600-38641400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr19:38611600-38653000 Weak transcription HUVEC blood vessel
16 chr19:38611800-38623600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr19:38611800-38623800 Weak transcription GM12878-XiMat blood
18 chr19:38611800-38634600 Weak transcription NH-A brain
19 chr19:38611800-38642600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr19:38611800-38653000 Weak transcription Fetal Kidney kidney
21 chr19:38613400-38633600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr19:38613400-38634400 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr19:38613600-38625600 Weak transcription Hela-S3 cervix
24 chr19:38613600-38634800 Weak transcription Primary T cells fromperipheralblood blood
25 chr19:38613800-38621200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:38613800-38621200 Weak transcription Primary hematopoietic stem cells blood
27 chr19:38613800-38621200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr19:38613800-38621200 Weak transcription Fetal Lung lung
29 chr19:38613800-38621200 Weak transcription Fetal Muscle Trunk muscle
30 chr19:38613800-38621200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr19:38613800-38621200 Weak transcription Thymus Thymus
32 chr19:38613800-38621400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr19:38613800-38621600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr19:38613800-38621600 Weak transcription Brain Cingulate Gyrus brain
35 chr19:38613800-38621600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr19:38613800-38621600 Weak transcription Rectal Smooth Muscle rectum
37 chr19:38613800-38621800 Weak transcription Muscle Satellite Cultured Cells --
38 chr19:38613800-38622400 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr19:38613800-38625400 Weak transcription Esophagus oesophagus
40 chr19:38613800-38625400 Weak transcription Fetal Muscle Leg muscle
41 chr19:38613800-38625400 Weak transcription Right Ventricle heart
42 chr19:38613800-38625400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr19:38613800-38625400 Weak transcription HSMMtube muscle
44 chr19:38613800-38625600 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr19:38613800-38625800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:38613800-38625800 Weak transcription Placenta Placenta
47 chr19:38613800-38626000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr19:38613800-38629800 Weak transcription Liver Liver
49 chr19:38613800-38630000 Weak transcription Brain Hippocampus Middle brain
50 chr19:38613800-38633000 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015