Variant report

Variant rs56241616
Chromosome Location chr19:19506092-19506093
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19497600-19515800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:19498000-19506600 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr19:19498000-19510400 Weak transcription A549 lung
4 chr19:19498000-19510400 Weak transcription NHDF-Ad bronchial
5 chr19:19498000-19515600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr19:19498200-19510400 Weak transcription Fetal Stomach stomach
7 chr19:19498400-19513600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr19:19498800-19506800 Enhancers Primary neutrophils fromperipheralblood blood
9 chr19:19499600-19507000 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr19:19499600-19507400 Enhancers Primary T helper cells PMA-I stimulated --
11 chr19:19499800-19506800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr19:19499800-19510400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr19:19500200-19506400 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr19:19500200-19510400 Weak transcription Brain Hippocampus Middle brain
15 chr19:19500400-19506800 Enhancers Primary T cells from cord blood blood
16 chr19:19500400-19509800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:19500400-19515400 Weak transcription Fetal Heart heart
18 chr19:19500600-19510400 Weak transcription Fetal Kidney kidney
19 chr19:19500600-19515800 Weak transcription Right Ventricle heart
20 chr19:19501200-19514000 Weak transcription Pancreas Pancrea
21 chr19:19501400-19511000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr19:19501400-19513600 Weak transcription Psoas Muscle Psoas
23 chr19:19501400-19513800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr19:19501600-19506200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:19501800-19506400 Enhancers Primary monocytes fromperipheralblood blood
26 chr19:19501800-19510800 Weak transcription Brain Substantia Nigra brain
27 chr19:19502600-19510400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr19:19502800-19506200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr19:19503200-19506200 Enhancers Lung lung
30 chr19:19503400-19506800 Enhancers Fetal Thymus thymus
31 chr19:19503600-19506400 Enhancers Adipose Nuclei Adipose
32 chr19:19503600-19506600 Enhancers Primary T cells fromperipheralblood blood
33 chr19:19503600-19506600 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr19:19503800-19506200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr19:19503800-19506600 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr19:19504000-19506200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr19:19504000-19506800 Enhancers Primary T helper cells fromperipheralblood blood
38 chr19:19504200-19506200 Enhancers Dnd41 blood
39 chr19:19504200-19506600 Enhancers HUES6 Cell Line embryonic stem cell
40 chr19:19504400-19506200 Enhancers Spleen Spleen
41 chr19:19504400-19506800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr19:19504600-19506200 Enhancers NHEK skin
43 chr19:19504600-19510400 Weak transcription Fetal Lung lung
44 chr19:19505000-19506200 Flanking Active TSS K562 blood
45 chr19:19505000-19506600 Enhancers Placenta Placenta
46 chr19:19505000-19506800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr19:19505200-19506200 Enhancers Sigmoid Colon Sigmoid Colon
48 chr19:19505200-19506200 Enhancers HUVEC blood vessel
49 chr19:19505400-19506400 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr19:19505400-19506600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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