Variant report

Variant	rs562461700
Chromosome Location	chr9:84886966-84886967
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049305	chr9:84667596-84918690	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv893507	chr9:84799537-85097651	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv8538	chr9:84885409-84887662	Weak transcription Enhancers	TF binding region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:84879000-84887400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr9:84881400-84889000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr9:84884800-84888800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:84884800-84890800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr9:84885000-84887200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr9:84885000-84887400	Enhancers	NHLF	lung
7	chr9:84885000-84888800	Enhancers	NHDF-Ad	bronchial
8	chr9:84885400-84887200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr9:84885400-84887200	Enhancers	Osteobl	bone
10	chr9:84885600-84888000	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr9:84885600-84888200	Weak transcription	HSMM	muscle
12	chr9:84885600-84888600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr9:84885600-84888600	Enhancers	NH-A	brain
14	chr9:84886200-84890200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr9:84886800-84888000	Weak transcription	Muscle Satellite Cultured Cells	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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