Variant report

Variant	rs562492431
Chromosome Location	chr5:98770161-98770162
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599118	chr5:98358191-99029453	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv599119	chr5:98358191-99315677	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv471631	chr5:98597573-98786486	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv2758005	chr5:98605325-98889594	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	esv2759358	chr5:98605325-98889594	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv1022266	chr5:98662648-99068661	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
7	nsv968223	chr5:98727131-98771078	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
8	nsv427725	chr5:98739083-99048829	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
9	nsv1033966	chr5:98753399-98878804	Enhancers ZNF genes & repeats Weak transcription	TF binding region CpG island lncRNA	3 gene(s)	inside rSNPs	diseases
10	nsv1023117	chr5:98753399-98935234	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island lncRNA	6 gene(s)	inside rSNPs	diseases
11	nsv1033873	chr5:98758435-98814748	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	nsv1015193	chr5:98758435-98819617	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv2763472	chr5:98767744-98813855	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
14	nsv1023389	chr5:98769659-98799864	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
15	nsv1022942	chr5:98769659-98809034	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
16	nsv1033015	chr5:98769659-98813843	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
17	nsv1015858	chr5:98769659-98814748	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	nsv1033525	chr5:98769659-98819617	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	nsv1032125	chr5:98769659-98821072	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
20	nsv1024998	chr5:98769659-98840614	Weak transcription Enhancers	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
21	nsv1021478	chr5:98769659-98844524	Enhancers Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
22	nsv1033351	chr5:98769659-98902554	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island lncRNA	4 gene(s)	inside rSNPs	diseases
23	nsv882420	chr5:98770145-99183797	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:98767600-98770200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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