Variant report

Variant rs562599761
Chromosome Location chr3:194993030-194993031
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:194990600-194993200 Active TSS A549 lung
2 chr3:194991000-194993200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:194991000-194993200 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr3:194992400-194993200 Flanking Active TSS Dnd41 blood
5 chr3:194992400-194993200 Flanking Active TSS HUVEC blood vessel
6 chr3:194992400-195009000 Weak transcription Spleen Spleen
7 chr3:194992600-194993200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr3:194992600-194993200 Flanking Active TSS Muscle Satellite Cultured Cells --
9 chr3:194992600-194993200 Flanking Active TSS GM12878-XiMat blood
10 chr3:194992600-195003600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:194992600-195003600 Weak transcription Small Intestine intestine
12 chr3:194992600-195008200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:194992600-195008800 Weak transcription Lung lung
14 chr3:194992600-195090000 Weak transcription Aorta Aorta
15 chr3:194992800-194993200 Enhancers Primary neutrophils fromperipheralblood blood
16 chr3:194992800-194994800 Weak transcription Right Atrium heart
17 chr3:194992800-194996200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr3:194992800-194997200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr3:194992800-195003600 Weak transcription Esophagus oesophagus
20 chr3:194992800-195003600 Weak transcription Fetal Muscle Trunk muscle
21 chr3:194992800-195003600 Weak transcription Fetal Muscle Leg muscle
22 chr3:194992800-195003600 Weak transcription Left Ventricle heart
23 chr3:194992800-195003600 Weak transcription Psoas Muscle Psoas
24 chr3:194992800-195003600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:194992800-195004800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr3:194992800-195005400 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr3:194992800-195008600 Weak transcription Ovary ovary
28 chr3:194992800-195039800 Weak transcription Fetal Brain Male brain
29 chr3:194992800-195039800 Weak transcription Right Ventricle heart
30 chr3:194993000-194993200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr3:194993000-194993200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr3:194993000-194993200 Enhancers Primary hematopoietic stem cells blood
33 chr3:194993000-194993200 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr3:194993000-194993200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:194993000-194993200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr3:194993000-194993200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr3:194993000-194993200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:194993000-194993200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr3:194993000-194993200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:194993000-194993200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:194993000-194993200 Enhancers Hela-S3 cervix
42 chr3:194993000-194993200 Enhancers HMEC breast
43 chr3:194993000-194993200 Enhancers K562 blood
44 chr3:194993000-194993200 Enhancers NHDF-Ad bronchial
45 chr3:194993000-194993200 Enhancers NHEK skin
46 chr3:194993000-194993200 Enhancers Osteobl bone
47 chr3:194993000-194993400 Enhancers Cortex derived primary cultured neurospheres brain
48 chr3:194993000-194994000 Weak transcription HepG2 liver
49 chr3:194993000-194994800 Weak transcription Liver Liver
50 chr3:194993000-194995000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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