Variant report

Variant rs562613819
Chromosome Location chr14:105330605-105330606
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105324000-105330800 Weak transcription Brain Substantia Nigra brain
2 chr14:105329800-105330800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr14:105329800-105331200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
4 chr14:105329800-105331200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
5 chr14:105329800-105331200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
6 chr14:105329800-105331200 Bivalent/Poised TSS Fetal Intestine Large intestine
7 chr14:105329800-105332600 Active TSS Gastric stomach
8 chr14:105329800-105333200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr14:105330000-105331200 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
10 chr14:105330000-105331200 Active TSS Stomach Mucosa stomach
11 chr14:105330000-105332400 Active TSS Duodenum Mucosa Duodenum
12 chr14:105330000-105332600 Active TSS Rectal Mucosa Donor 31 rectum
13 chr14:105330000-105332600 Active TSS HMEC breast
14 chr14:105330000-105332800 Active TSS NHEK skin
15 chr14:105330000-105333200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
16 chr14:105330000-105333400 Active TSS H9 Cell Line embryonic stem cell
17 chr14:105330000-105333400 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr14:105330200-105330800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
19 chr14:105330200-105330800 Flanking Active TSS Pancreas Pancrea
20 chr14:105330200-105331200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr14:105330200-105331200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
22 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Brain Female brain
23 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Intestine Small intestine
24 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Kidney kidney
25 chr14:105330200-105331400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
26 chr14:105330200-105331400 Bivalent/Poised TSS HSMM muscle
27 chr14:105330200-105332400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
28 chr14:105330200-105332600 Active TSS ES-WA7 Cell Line embryonic stem cell
29 chr14:105330200-105332600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
30 chr14:105330200-105332600 Active TSS Small Intestine intestine
31 chr14:105330200-105332800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr14:105330200-105332800 Active TSS HUES48 Cell Line embryonic stem cell
33 chr14:105330200-105332800 Active TSS Rectal Smooth Muscle rectum
34 chr14:105330200-105333000 Active TSS Pancreatic Islets Pancreatic Islet
35 chr14:105330400-105330800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr14:105330400-105330800 Bivalent Enhancer H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr14:105330400-105330800 Bivalent Enhancer Primary T cells fromperipheralblood blood
38 chr14:105330400-105330800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr14:105330400-105330800 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr14:105330400-105330800 Enhancers Primary T helper cells fromperipheralblood blood
41 chr14:105330400-105330800 Flanking Active TSS A549 lung
42 chr14:105330400-105331000 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
43 chr14:105330400-105331000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr14:105330400-105331000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr14:105330400-105331000 Bivalent Enhancer Fetal Muscle Trunk muscle
46 chr14:105330400-105331000 Bivalent Enhancer Fetal Thymus thymus
47 chr14:105330400-105331000 Enhancers Spleen Spleen
48 chr14:105330400-105331200 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr14:105330400-105331200 Bivalent Enhancer Primary B cells from peripheral blood blood
50 chr14:105330400-105331200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin

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