Variant report

Variant rs562644275
Chromosome Location chr11:58336757-58336758
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58300000-58340600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:58300600-58338600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:58309600-58338800 Strong transcription Primary monocytes fromperipheralblood blood
4 chr11:58315600-58340400 Weak transcription Stomach Mucosa stomach
5 chr11:58318400-58341000 Weak transcription Right Ventricle heart
6 chr11:58318400-58344800 Weak transcription Fetal Brain Male brain
7 chr11:58318600-58344400 Weak transcription Placenta Amnion Placenta Amnion
8 chr11:58318800-58336800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr11:58318800-58340600 Weak transcription NHLF lung
10 chr11:58318800-58341400 Weak transcription Psoas Muscle Psoas
11 chr11:58319200-58343000 Weak transcription Fetal Brain Female brain
12 chr11:58320000-58341000 Weak transcription HSMMtube muscle
13 chr11:58320200-58340800 Weak transcription Colon Smooth Muscle Colon
14 chr11:58320600-58338200 Weak transcription HMEC breast
15 chr11:58321600-58337200 Weak transcription Rectal Smooth Muscle rectum
16 chr11:58321600-58340400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr11:58321800-58340400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr11:58321800-58341200 Weak transcription Colonic Mucosa Colon
19 chr11:58321800-58345000 Weak transcription Ovary ovary
20 chr11:58322200-58337000 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr11:58322400-58336800 Weak transcription Spleen Spleen
22 chr11:58322400-58344200 Weak transcription Fetal Lung lung
23 chr11:58329400-58341000 Weak transcription Brain Angular Gyrus brain
24 chr11:58329400-58342600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:58329400-58344400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr11:58330200-58343000 Weak transcription Fetal Kidney kidney
27 chr11:58330400-58336800 Weak transcription Pancreas Pancrea
28 chr11:58330400-58338800 Genic enhancers Primary T helper cells PMA-I stimulated --
29 chr11:58330600-58345000 Weak transcription Gastric stomach
30 chr11:58331000-58338000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr11:58331400-58341000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr11:58332800-58340200 Weak transcription Primary hematopoietic stem cells blood
33 chr11:58334200-58337000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr11:58334200-58337000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr11:58334400-58338200 Strong transcription HSMM muscle
36 chr11:58334600-58338400 Genic enhancers Primary T helper naive cells from peripheral blood blood
37 chr11:58334800-58339600 Genic enhancers Primary T helper cells fromperipheralblood blood
38 chr11:58335000-58336800 Genic enhancers NHDF-Ad bronchial
39 chr11:58335000-58337400 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr11:58335000-58338600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
41 chr11:58335400-58338800 Genic enhancers Primary T cells fromperipheralblood blood
42 chr11:58335600-58340400 Weak transcription Brain Hippocampus Middle brain
43 chr11:58335800-58339800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:58335800-58340400 Weak transcription Hela-S3 cervix
45 chr11:58336000-58336800 Genic enhancers Primary T cells from cord blood blood
46 chr11:58336000-58337200 Genic enhancers Primary hematopoietic stem cells short term culture blood
47 chr11:58336000-58337400 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr11:58336000-58337600 Strong transcription Adipose Nuclei Adipose
49 chr11:58336000-58338200 Strong transcription Brain Cingulate Gyrus brain
50 chr11:58336000-58338400 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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