Variant report

Variant	rs562736761
Chromosome Location	chr12:9166421-9166422
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832327	chr12:9081779-9246220	Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv1045317	chr12:9113216-9544655	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
3	esv2754892	chr12:9136351-9179007	Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv973020	chr12:9163929-9182709	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9133800-9170200	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr12:9142400-9168000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr12:9152400-9167600	Weak transcription	Left Ventricle	heart
4	chr12:9159600-9168400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr12:9162600-9167200	Weak transcription	Brain Anterior Caudate	brain
6	chr12:9163800-9166600	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr12:9164400-9166600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
8	chr12:9164800-9168000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr12:9165400-9167800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr12:9165600-9166800	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
11	chr12:9165600-9167400	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr12:9165600-9168000	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
13	chr12:9165800-9182400	Weak transcription	Adipose Nuclei	Adipose
14	chr12:9166000-9166600	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
15	chr12:9166200-9167800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr12:9166200-9168200	Weak transcription	Primary T helper naive cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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