Variant report

Variant	rs562869387
Chromosome Location	chr12:117643067-117643068
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:117638881..117640489-chr12:117642610..117644525,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832526	chr12:117530234-117723821	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv510592	chr12:117618872-117684713	Bivalent/Poised TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
3	nsv560347	chr12:117623651-117643067	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	n/a
4	esv1844687	chr12:117630765-117643067	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	esv1844732	chr12:117630765-117643067	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv560348	chr12:117630765-117643067	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
7	esv3498541	chr12:117639969-117644967	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3500134	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3500135	chr12:117640219-117644417	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv1845178	chr12:117640545-117643067	Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv560351	chr12:117640545-117643067	Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3498552	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3498563	chr12:117640879-117643722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv52574	chr12:117640973-117643553	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv21122	chr12:117641095-117643946	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv1843185	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv1843698	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv1846062	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv1847915	chr12:117641229-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv1848672	chr12:117641229-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv1850885	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
22	nsv560359	chr12:117641229-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
23	nsv560360	chr12:117641229-117650873	Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
24	esv1845703	chr12:117641259-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
25	esv1845740	chr12:117641259-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
26	esv1846257	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
27	esv1847161	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
28	esv1847361	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
29	esv1849050	chr12:117641314-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
30	esv1849338	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
31	esv1849508	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
32	esv1849577	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
33	esv1850680	chr12:117641314-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
34	nsv560367	chr12:117641314-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
35	esv1846026	chr12:117641314-117650873	Enhancers Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
36	nsv560373	chr12:117641786-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
37	nsv560374	chr12:117641786-117650873	Enhancers Flanking Active TSS Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
38	nsv560378	chr12:117641838-117643067	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
39	nsv560381	chr12:117641949-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
40	nsv560382	chr12:117641949-117650873	Enhancers Flanking Active TSS Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
41	nsv560383	chr12:117642002-117643067	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117633600-117645000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:117642200-117648000	Weak transcription	Right Atrium	heart

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