Variant report

Variant rs56288823
Chromosome Location chr4:55604639-55604640
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:55561000-55606600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr4:55584400-55606200 Weak transcription Brain Hippocampus Middle brain
3 chr4:55585200-55608400 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr4:55587800-55607600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:55588200-55608000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr4:55588600-55611600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr4:55589600-55608400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr4:55589800-55607400 Weak transcription Left Ventricle heart
9 chr4:55590000-55608000 Strong transcription Primary hematopoietic stem cells blood
10 chr4:55592600-55609000 Weak transcription Fetal Stomach stomach
11 chr4:55593400-55607200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr4:55593600-55606800 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr4:55594400-55607000 Weak transcription H9 Cell Line embryonic stem cell
14 chr4:55597800-55607600 Weak transcription Fetal Kidney kidney
15 chr4:55598200-55607400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr4:55600000-55610000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr4:55600200-55607000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr4:55601000-55616000 Weak transcription Gastric stomach
19 chr4:55601600-55605800 Strong transcription NHDF-Ad bronchial
20 chr4:55601800-55607200 Weak transcription Brain Germinal Matrix brain
21 chr4:55602000-55606200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr4:55602000-55606200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr4:55602200-55604800 Strong transcription H1 Cell Line embryonic stem cell
24 chr4:55602200-55605000 Strong transcription Aorta Aorta
25 chr4:55602200-55606200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr4:55602200-55606400 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr4:55602600-55605000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:55602600-55606400 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr4:55602600-55606400 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr4:55602800-55605200 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr4:55603000-55606000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:55603000-55607000 Weak transcription Brain Cingulate Gyrus brain
33 chr4:55603200-55606200 Strong transcription Ovary ovary
34 chr4:55603400-55605000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr4:55603600-55607000 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr4:55603600-55609200 Weak transcription Fetal Muscle Leg muscle
37 chr4:55603800-55606800 Weak transcription Brain Anterior Caudate brain
38 chr4:55603800-55607000 Weak transcription Brain Substantia Nigra brain
39 chr4:55604000-55605800 Weak transcription Fetal Muscle Trunk muscle
40 chr4:55604000-55607000 Weak transcription Fetal Heart heart
41 chr4:55604000-55608200 Weak transcription Fetal Brain Female brain
42 chr4:55604400-55604800 Enhancers HUVEC blood vessel
43 chr4:55604600-55604800 Enhancers Lung lung

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