The 2.0 version of rSNPBase

Variant report

Variant rs562920224
Chromosome Location chr6:37296613-37296614
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37277600-37298600 Weak transcription Psoas Muscle Psoas
2 chr6:37285000-37298200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:37285000-37298600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:37286000-37298600 Weak transcription Brain Substantia Nigra brain
5 chr6:37286000-37298800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:37286000-37299000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr6:37286200-37298800 Weak transcription Small Intestine intestine
8 chr6:37286400-37298600 Weak transcription Brain Cingulate Gyrus brain
9 chr6:37286600-37299400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:37287200-37297600 Weak transcription Esophagus oesophagus
11 chr6:37287200-37301000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr6:37287200-37302000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr6:37287800-37298600 Weak transcription H9 Cell Line embryonic stem cell
14 chr6:37287800-37298800 Weak transcription Pancreas Pancrea
15 chr6:37288000-37297800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:37288000-37298600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr6:37288000-37298800 Weak transcription Brain Angular Gyrus brain
18 chr6:37288200-37301200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr6:37288600-37298800 Weak transcription Aorta Aorta
20 chr6:37288600-37298800 Weak transcription Right Ventricle heart
21 chr6:37288600-37301600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:37289000-37298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr6:37289400-37300800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:37289600-37297000 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr6:37289600-37298600 Weak transcription Placenta Placenta
26 chr6:37289600-37298600 Weak transcription Gastric stomach
27 chr6:37289600-37298800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr6:37289800-37297000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr6:37289800-37297200 Weak transcription Primary hematopoietic stem cells blood
30 chr6:37289800-37298400 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr6:37289800-37298400 Weak transcription Brain Hippocampus Middle brain
32 chr6:37290000-37299000 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr6:37290200-37298200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr6:37290600-37297000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr6:37290600-37298400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:37290600-37302800 Weak transcription Primary B cells from cord blood blood
37 chr6:37290800-37297200 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr6:37290800-37298600 Weak transcription Primary B cells from peripheral blood blood
39 chr6:37290800-37298600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr6:37290800-37298800 Weak transcription Lung lung
41 chr6:37291000-37297000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:37291000-37297200 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr6:37291000-37298600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:37291000-37298600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr6:37291200-37298400 Weak transcription Spleen Spleen
46 chr6:37291200-37298600 Weak transcription Fetal Muscle Trunk muscle
47 chr6:37291400-37296800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:37291400-37296800 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr6:37291400-37297200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr6:37291400-37298600 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015