Variant report

Variant	rs562922721
Chromosome Location	chr7:118269986-118269987
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869971	chr7:117420583-118274149	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	nsv889093	chr7:117977091-118709754	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv3370633	chr7:118269216-118274214	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118269600-118272400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr7:118269600-118272400	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr7:118269800-118270200	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr7:118269800-118270400	Enhancers	H1 Cell Line	embryonic stem cell
5	chr7:118269800-118270400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr7:118269800-118270400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr7:118269800-118271800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr7:118269800-118272000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr7:118269800-118272200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:118269800-118272200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr7:118269800-118272200	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr7:118269800-118272200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:118269800-118272400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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