Variant report

Variant rs562937263
Chromosome Location chr11:46005522-46005523
allele -/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45993000-46015000 Weak transcription Psoas Muscle Psoas
2 chr11:45993000-46017600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:46000400-46013000 Weak transcription Fetal Intestine Large intestine
4 chr11:46000600-46010400 Weak transcription Hela-S3 cervix
5 chr11:46000800-46006200 Enhancers Fetal Heart heart
6 chr11:46000800-46010200 Weak transcription Liver Liver
7 chr11:46000800-46012400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr11:46001000-46015400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:46001400-46013200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr11:46001400-46013600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr11:46001400-46015200 Weak transcription Pancreas Pancrea
12 chr11:46001400-46016000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
14 chr11:46001600-46006800 Weak transcription Thymus Thymus
15 chr11:46001600-46007200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr11:46001600-46015200 Weak transcription Fetal Muscle Trunk muscle
17 chr11:46001600-46015400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr11:46001600-46016400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr11:46001600-46021000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr11:46002000-46015000 Weak transcription Fetal Muscle Leg muscle
21 chr11:46002000-46025000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:46002000-46042400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr11:46002200-46024800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr11:46002200-46025000 Weak transcription Primary monocytes fromperipheralblood blood
26 chr11:46002600-46005800 Weak transcription Primary B cells from cord blood blood
27 chr11:46002600-46012000 Weak transcription GM12878-XiMat blood
28 chr11:46002600-46023200 Weak transcription Primary B cells from peripheral blood blood
29 chr11:46003600-46005600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr11:46003600-46006200 Enhancers H1 Cell Line embryonic stem cell
31 chr11:46003600-46006400 Enhancers Fetal Brain Male brain
32 chr11:46003600-46006800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:46003800-46006200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr11:46003800-46006400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr11:46004000-46005800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr11:46004000-46006200 Enhancers Brain Substantia Nigra brain
37 chr11:46004000-46007000 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr11:46004000-46007600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr11:46004200-46006000 Enhancers Brain Anterior Caudate brain
40 chr11:46004200-46006000 Enhancers Brain Inferior Temporal Lobe brain
41 chr11:46004200-46006200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr11:46004400-46005600 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr11:46004400-46005600 Enhancers Colon Smooth Muscle Colon
44 chr11:46004400-46005600 Flanking Active TSS K562 blood
45 chr11:46004400-46006000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr11:46004400-46006000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr11:46004400-46006000 Enhancers H9 Cell Line embryonic stem cell
48 chr11:46004400-46006000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
49 chr11:46004400-46006200 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr11:46004600-46005600 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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