The 2.0 version of rSNPBase

Variant report

Variant rs56301120
Chromosome Location chr1:226032018-226032019
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226013600-226052600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:226013800-226037200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:226014000-226032800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr1:226014600-226035600 Weak transcription Small Intestine intestine
5 chr1:226014800-226047800 Weak transcription Psoas Muscle Psoas
6 chr1:226015400-226032400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:226015400-226033200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:226015600-226033600 Weak transcription K562 blood
9 chr1:226016000-226051000 Weak transcription NH-A brain
10 chr1:226016400-226033400 Strong transcription Fetal Intestine Small intestine
11 chr1:226016800-226033600 Weak transcription Primary monocytes fromperipheralblood blood
12 chr1:226017400-226049800 Weak transcription HUVEC blood vessel
13 chr1:226020400-226033400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:226020600-226042000 Weak transcription Hela-S3 cervix
15 chr1:226020600-226042400 Weak transcription HSMM muscle
16 chr1:226020800-226033400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr1:226020800-226033800 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:226021000-226033400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:226022200-226033200 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr1:226022200-226033200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:226022800-226033800 Weak transcription Stomach Mucosa stomach
22 chr1:226023000-226039600 Weak transcription NHDF-Ad bronchial
23 chr1:226023800-226035800 Weak transcription Fetal Brain Male brain
24 chr1:226024000-226032800 Strong transcription Stomach Smooth Muscle stomach
25 chr1:226024400-226033200 Strong transcription Fetal Muscle Leg muscle
26 chr1:226024600-226032600 Strong transcription Fetal Stomach stomach
27 chr1:226024600-226032800 Strong transcription Skeletal Muscle Female skeletal muscle
28 chr1:226024600-226034000 Weak transcription Primary hematopoietic stem cells blood
29 chr1:226025200-226032600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:226025200-226033200 Strong transcription A549 lung
31 chr1:226025200-226033400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:226025400-226032600 Strong transcription Fetal Lung lung
33 chr1:226025800-226034800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:226025800-226036400 Strong transcription Lung lung
35 chr1:226025800-226036400 Strong transcription Osteobl bone
36 chr1:226026000-226033200 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr1:226026000-226033400 Strong transcription Duodenum Smooth Muscle Duodenum
38 chr1:226026000-226034200 Strong transcription Ovary ovary
39 chr1:226026200-226035200 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr1:226026800-226061600 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:226027000-226033800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:226027200-226033600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:226027800-226033200 Weak transcription Rectal Smooth Muscle rectum
44 chr1:226028600-226032600 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:226028600-226033800 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:226029000-226033600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:226029000-226033800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:226029400-226033200 Strong transcription Brain Anterior Caudate brain
49 chr1:226029600-226033200 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr1:226029600-226033200 Strong transcription Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015