Variant report

Variant	rs563030726
Chromosome Location	chr7:80242527-80242528
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888524	chr7:80107798-80723062	Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv831043	chr7:80119414-80322092	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv948605	chr7:80119690-80298887	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1020682	chr7:80120651-80297697	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv464606	chr7:80177084-80311794	Active TSS Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
6	nsv607682	chr7:80177084-80311794	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
7	nsv1025144	chr7:80197286-80271841	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv1026688	chr7:80231657-80307236	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
9	nsv1020745	chr7:80231657-80309495	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
10	nsv888526	chr7:80240943-80354229	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80237600-80242800	Enhancers	Liver	Liver
2	chr7:80237600-80243000	Enhancers	Fetal Heart	heart
3	chr7:80239400-80244600	Weak transcription	Right Atrium	heart
4	chr7:80240400-80242600	Enhancers	Osteobl	bone
5	chr7:80240400-80244600	Weak transcription	Right Ventricle	heart
6	chr7:80240400-80245000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:80240600-80245200	Enhancers	Hela-S3	cervix
8	chr7:80240800-80242800	Enhancers	NH-A	brain
9	chr7:80240800-80242800	Enhancers	NHLF	lung
10	chr7:80240800-80243000	Enhancers	Muscle Satellite Cultured Cells	--
11	chr7:80240800-80243400	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr7:80240800-80243800	Weak transcription	Left Ventricle	heart
13	chr7:80241000-80246400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr7:80241000-80251200	Weak transcription	Psoas Muscle	Psoas
15	chr7:80241200-80244200	Weak transcription	Duodenum Mucosa	Duodenum
16	chr7:80241200-80245400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr7:80241400-80242800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr7:80241400-80243400	Weak transcription	Adipose Nuclei	Adipose
19	chr7:80241400-80243800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr7:80241400-80244200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr7:80241600-80243800	Weak transcription	NHDF-Ad	bronchial
22	chr7:80241600-80244000	Weak transcription	HSMMtube	muscle
23	chr7:80241600-80244200	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr7:80241800-80242600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr7:80241800-80243800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr7:80242000-80242800	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr7:80242000-80243000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr7:80242200-80243000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr7:80242200-80243000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
30	chr7:80242200-80243200	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr7:80242200-80244000	Weak transcription	A549	lung
32	chr7:80242200-80252800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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