Variant report

Variant rs56309008
Chromosome Location chr4:106542532-106542533
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106516000-106553000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:106516400-106545600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:106521800-106545600 Weak transcription Right Atrium heart
4 chr4:106525400-106558600 Weak transcription Fetal Intestine Large intestine
5 chr4:106527200-106559000 Weak transcription Fetal Intestine Small intestine
6 chr4:106537200-106545000 Weak transcription Lung lung
7 chr4:106540600-106543600 Weak transcription Left Ventricle heart
8 chr4:106540600-106553800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr4:106540800-106543400 Weak transcription Fetal Heart heart
10 chr4:106541000-106542800 Enhancers Stomach Mucosa stomach
11 chr4:106541000-106543200 Weak transcription Fetal Muscle Leg muscle
12 chr4:106541000-106543400 Weak transcription Pancreas Pancrea
13 chr4:106541200-106544800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr4:106541200-106545400 Weak transcription Liver Liver
15 chr4:106541200-106545800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr4:106541400-106545000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr4:106541600-106545600 Weak transcription Fetal Lung lung
18 chr4:106541800-106542600 Enhancers HMEC breast
19 chr4:106541800-106542800 Enhancers NH-A brain
20 chr4:106541800-106545200 Enhancers Skeletal Muscle Female skeletal muscle
21 chr4:106542000-106542600 Enhancers Muscle Satellite Cultured Cells --
22 chr4:106542200-106542600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr4:106542200-106544200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr4:106542400-106542800 Weak transcription Psoas Muscle Psoas
25 chr4:106542400-106542800 Enhancers HSMM muscle
26 chr4:106542400-106543200 Enhancers HSMMtube muscle
27 chr4:106542400-106546600 Enhancers Osteobl bone

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