The 2.0 version of rSNPBase

Variant report

Variant rs56309410
Chromosome Location chr1:61794893-61794894
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61744600-61798600 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61784800-61799400 Weak transcription Left Ventricle heart
3 chr1:61784800-61800400 Weak transcription Ovary ovary
4 chr1:61784800-61802800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:61784800-61803200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:61784800-61803600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:61785000-61797200 Weak transcription HUVEC blood vessel
8 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells blood
9 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:61786000-61813600 Weak transcription Duodenum Mucosa Duodenum
11 chr1:61786200-61799000 Weak transcription Fetal Intestine Large intestine
12 chr1:61786400-61798600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:61786600-61799800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:61786600-61800400 Weak transcription Brain Anterior Caudate brain
15 chr1:61786600-61800400 Weak transcription Colon Smooth Muscle Colon
16 chr1:61786600-61800400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:61788400-61800600 Weak transcription Gastric stomach
18 chr1:61788400-61802800 Weak transcription Placenta Placenta
19 chr1:61790000-61795600 Weak transcription A549 lung
20 chr1:61790000-61799000 Weak transcription Liver Liver
21 chr1:61790000-61799000 Weak transcription K562 blood
22 chr1:61790000-61799800 Weak transcription Right Ventricle heart
23 chr1:61790000-61803600 Weak transcription Hela-S3 cervix
24 chr1:61790000-61805400 Weak transcription Lung lung
25 chr1:61790200-61800600 Weak transcription Pancreas Pancrea
26 chr1:61790400-61798000 Weak transcription Fetal Muscle Leg muscle
27 chr1:61790400-61798200 Weak transcription Aorta Aorta
28 chr1:61790600-61795400 Weak transcription HMEC breast
29 chr1:61791200-61795200 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:61791200-61799000 Weak transcription Fetal Stomach stomach
31 chr1:61791200-61800200 Weak transcription Fetal Intestine Small intestine
32 chr1:61791200-61800400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:61791400-61799000 Weak transcription Fetal Lung lung
34 chr1:61792000-61795200 Weak transcription NHEK skin
35 chr1:61792200-61795200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:61792200-61796200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:61792400-61795200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:61792600-61798000 Weak transcription HepG2 liver
39 chr1:61792600-61799600 Weak transcription Psoas Muscle Psoas
40 chr1:61792800-61800400 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:61793000-61800400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:61793200-61799200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015