Variant report

Variant rs56310297
Chromosome Location chr21:47580600-47580601
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47562600-47580600 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr21:47573200-47581000 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr21:47573400-47590200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr21:47573600-47581000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr21:47573600-47581000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr21:47573600-47581000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr21:47573600-47581400 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr21:47573600-47581800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr21:47573600-47583200 Weak transcription Brain Substantia Nigra brain
10 chr21:47573600-47589600 Weak transcription Primary hematopoietic stem cells blood
11 chr21:47573600-47600200 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr21:47573600-47602000 Weak transcription Gastric stomach
13 chr21:47573800-47581000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr21:47573800-47581000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr21:47573800-47581000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr21:47573800-47581200 Weak transcription Rectal Smooth Muscle rectum
17 chr21:47573800-47581800 Weak transcription Esophagus oesophagus
18 chr21:47573800-47583000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr21:47573800-47585400 Weak transcription Brain Angular Gyrus brain
20 chr21:47573800-47585600 Weak transcription Muscle Satellite Cultured Cells --
21 chr21:47573800-47588000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr21:47573800-47590800 Weak transcription Brain Cingulate Gyrus brain
23 chr21:47573800-47591400 Weak transcription Left Ventricle heart
24 chr21:47573800-47592000 Weak transcription Right Ventricle heart
25 chr21:47573800-47593400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr21:47573800-47593400 Weak transcription Brain Anterior Caudate brain
27 chr21:47573800-47602200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr21:47573800-47603800 Weak transcription Right Atrium heart
29 chr21:47574000-47580600 Weak transcription Pancreas Pancrea
30 chr21:47574000-47580800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr21:47574000-47581200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr21:47574000-47590400 Weak transcription Placenta Placenta
33 chr21:47574200-47590800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr21:47575800-47583800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr21:47576000-47581000 Strong transcription Fetal Stomach stomach
36 chr21:47576000-47581200 Weak transcription Colonic Mucosa Colon
37 chr21:47576200-47581000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr21:47576400-47580800 Weak transcription Fetal Intestine Large intestine
39 chr21:47576400-47580800 Weak transcription Thymus Thymus
40 chr21:47576400-47581000 Weak transcription Lung lung
41 chr21:47576600-47581200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr21:47576600-47581200 Weak transcription Spleen Spleen
43 chr21:47577600-47581000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr21:47577800-47582600 Strong transcription Fetal Intestine Small intestine
45 chr21:47578600-47580800 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr21:47578800-47581200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr21:47579200-47582000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr21:47579400-47582200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr21:47579600-47582000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr21:47579600-47582000 Strong transcription Ovary ovary

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