Variant report

Variant	rs563176538
Chromosome Location	chr7:128143311-128143312
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831124	chr7:127970345-128147910	Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
2	esv1794896	chr7:128142170-128170380	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:128117800-128162800	Weak transcription	Pancreas	Pancrea
2	chr7:128117800-128163400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:128118000-128146400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr7:128118000-128146400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr7:128118200-128146400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr7:128118400-128147000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr7:128121400-128147000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr7:128121800-128143800	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr7:128122000-128155400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr7:128122400-128156800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr7:128128800-128143400	Weak transcription	HepG2	liver
12	chr7:128132000-128145000	Strong transcription	Fetal Stomach	stomach
13	chr7:128132800-128143800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr7:128133000-128143600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr7:128133400-128144000	Strong transcription	Adipose Nuclei	Adipose
16	chr7:128133600-128143800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr7:128133600-128144600	Strong transcription	Fetal Thymus	thymus
18	chr7:128137800-128143400	Weak transcription	A549	lung
19	chr7:128138000-128147200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr7:128138000-128147800	Weak transcription	Primary hematopoietic stem cells	blood
21	chr7:128138200-128143600	Weak transcription	HSMMtube	muscle
22	chr7:128138200-128146400	Weak transcription	Brain Substantia Nigra	brain
23	chr7:128138200-128147600	Weak transcription	Small Intestine	intestine
24	chr7:128138400-128143400	Weak transcription	Esophagus	oesophagus
25	chr7:128138400-128143800	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr7:128138400-128145200	Weak transcription	Right Ventricle	heart
27	chr7:128140200-128146400	Weak transcription	Primary B cells from cord blood	blood
28	chr7:128140400-128143600	Weak transcription	Fetal Lung	lung
29	chr7:128140800-128143400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr7:128141200-128144200	Weak transcription	Rectal Smooth Muscle	rectum
31	chr7:128141200-128145400	Weak transcription	Osteobl	bone
32	chr7:128141400-128143800	Weak transcription	Gastric	stomach
33	chr7:128141400-128144800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr7:128141400-128144800	Weak transcription	Rectal Mucosa Donor 31	rectum
35	chr7:128141600-128143400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr7:128141600-128143400	Weak transcription	Ovary	ovary
37	chr7:128141600-128143600	Weak transcription	NH-A	brain
38	chr7:128141600-128143800	Weak transcription	Colon Smooth Muscle	Colon
39	chr7:128141600-128145000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr7:128141600-128145600	Weak transcription	GM12878-XiMat	blood
41	chr7:128141600-128146400	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr7:128141600-128150600	Weak transcription	Fetal Brain Female	brain
43	chr7:128141800-128152000	Weak transcription	K562	blood
44	chr7:128142000-128143600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr7:128142000-128143600	Weak transcription	Psoas Muscle	Psoas
46	chr7:128142000-128144000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr7:128142000-128145000	Weak transcription	NHEK	skin
48	chr7:128142000-128147000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
49	chr7:128142000-128147000	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr7:128142000-128147200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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