Variant report

Variant rs563196608
Chromosome Location chr2:112123750-112123751
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:112104400-112134600 Weak transcription HSMMtube muscle
2 chr2:112113800-112191600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:112114400-112125800 Weak transcription A549 lung
4 chr2:112115000-112125200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr2:112115000-112125400 Weak transcription Muscle Satellite Cultured Cells --
6 chr2:112115000-112125400 Weak transcription NHEK skin
7 chr2:112115000-112128000 Weak transcription HMEC breast
8 chr2:112115000-112153200 Weak transcription HSMM muscle
9 chr2:112115200-112158600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:112115400-112126800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:112117000-112123800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:112117200-112124000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:112117200-112124000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:112119600-112125000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:112119800-112136400 Weak transcription Dnd41 blood
16 chr2:112123400-112123800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr2:112123600-112123800 Bivalent Enhancer H1 Cell Line embryonic stem cell
18 chr2:112123600-112123800 Flanking Active TSS Brain Cingulate Gyrus brain
19 chr2:112123600-112123800 Enhancers Left Ventricle heart
20 chr2:112123600-112123800 Flanking Active TSS K562 blood
21 chr2:112123600-112123800 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
22 chr2:112123600-112124000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:112123600-112124000 Enhancers Primary B cells from peripheral blood blood
24 chr2:112123600-112124000 Active TSS Primary T cells from cord blood blood
25 chr2:112123600-112124000 Enhancers Primary hematopoietic stem cells blood
26 chr2:112123600-112124000 Enhancers Cortex derived primary cultured neurospheres brain
27 chr2:112123600-112124000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:112123600-112124000 Active TSS Fetal Adrenal Gland Adrenal Gland
29 chr2:112123600-112124000 Active TSS Right Atrium heart
30 chr2:112123600-112124200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr2:112123600-112124200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:112123600-112124200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:112123600-112124200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:112123600-112124200 Active TSS Adipose Nuclei Adipose
35 chr2:112123600-112124200 Active TSS Stomach Smooth Muscle stomach
36 chr2:112123600-112124400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:112123600-112124400 Active TSS Fetal Brain Female brain
38 chr2:112123600-112124600 Enhancers Primary monocytes fromperipheralblood blood
39 chr2:112123600-112124600 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr2:112123600-112124600 Enhancers Fetal Lung lung
41 chr2:112123600-112124600 Enhancers Fetal Muscle Leg muscle

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