Variant report

Variant	rs563219209
Chromosome Location	chr1:71132579-71132580
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv871024	chr1:71088106-71169865	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3420862	chr1:71132408-71133777	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71132000-71134600	Enhancers	Fetal Heart	heart
2	chr1:71132200-71132600	Enhancers	Esophagus	oesophagus
3	chr1:71132200-71132800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:71132200-71132800	Enhancers	Gastric	stomach
5	chr1:71132200-71132800	Enhancers	Left Ventricle	heart
6	chr1:71132200-71132800	Enhancers	Lung	lung
7	chr1:71132200-71132800	Enhancers	Right Atrium	heart
8	chr1:71132200-71133000	Enhancers	Aorta	Aorta
9	chr1:71132200-71133000	Enhancers	Pancreas	Pancrea
10	chr1:71132200-71133800	Enhancers	Rectal Smooth Muscle	rectum
11	chr1:71132400-71132600	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr1:71132400-71133200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:71132400-71137600	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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