The 2.0 version of rSNPBase

Variant report

Variant rs56323802
Chromosome Location chr1:120517103-120517104
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:120468600-120532800 Weak transcription Stomach Mucosa stomach
2 chr1:120490000-120517600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:120490200-120521000 Strong transcription Primary B cells from cord blood blood
4 chr1:120491200-120538800 Weak transcription Fetal Brain Male brain
5 chr1:120504600-120517600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:120508000-120517800 Weak transcription Psoas Muscle Psoas
7 chr1:120508400-120518600 Weak transcription Fetal Brain Female brain
8 chr1:120508600-120529800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:120508800-120517800 Weak transcription Brain Angular Gyrus brain
10 chr1:120508800-120524600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:120509000-120533000 Weak transcription Brain Cingulate Gyrus brain
12 chr1:120509600-120520600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:120509600-120520600 Weak transcription Right Ventricle heart
14 chr1:120509800-120557600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:120510200-120517600 Weak transcription Brain Hippocampus Middle brain
16 chr1:120510200-120519800 Weak transcription Fetal Heart heart
17 chr1:120510200-120529600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:120510200-120532800 Weak transcription Brain Anterior Caudate brain
19 chr1:120510200-120538800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:120510200-120552200 Weak transcription HUVEC blood vessel
21 chr1:120510400-120529800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr1:120510600-120527400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:120510600-120528400 Weak transcription Hela-S3 cervix
24 chr1:120510800-120518000 Strong transcription Fetal Muscle Leg muscle
25 chr1:120510800-120521000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:120510800-120528600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:120510800-120529400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:120510800-120532800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:120510800-120533000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr1:120510800-120557400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:120511000-120523000 Weak transcription Spleen Spleen
32 chr1:120511200-120517800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:120511200-120517800 Strong transcription HSMM muscle
34 chr1:120511200-120520800 Weak transcription Ovary ovary
35 chr1:120511200-120522400 Strong transcription Primary B cells from peripheral blood blood
36 chr1:120511200-120529400 Weak transcription Left Ventricle heart
37 chr1:120511600-120557800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:120512000-120518000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:120512200-120527400 Weak transcription Placenta Amnion Placenta Amnion
40 chr1:120512400-120517200 Weak transcription Right Atrium heart
41 chr1:120512400-120520800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:120512400-120521000 Weak transcription Esophagus oesophagus
43 chr1:120512400-120524200 Weak transcription Rectal Smooth Muscle rectum
44 chr1:120512400-120527000 Weak transcription Placenta Placenta
45 chr1:120512400-120527400 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:120512400-120543600 Weak transcription Fetal Intestine Small intestine
47 chr1:120512600-120528800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:120512600-120529200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:120512600-120529200 Weak transcription Duodenum Mucosa Duodenum
50 chr1:120512600-120532800 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015