Variant report

Variant rs563263565
Chromosome Location chr6:118230011-118230012
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118227400-118230200 Active TSS Brain Angular Gyrus brain
2 chr6:118227400-118230400 Active TSS Brain Inferior Temporal Lobe brain
3 chr6:118227800-118230200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:118227800-118230400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr6:118227800-118230400 Active TSS Brain Cingulate Gyrus brain
6 chr6:118227800-118230400 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
7 chr6:118228000-118230200 Active TSS Brain Anterior Caudate brain
8 chr6:118228000-118230200 Bivalent/Poised TSS Fetal Intestine Large intestine
9 chr6:118228000-118230600 Active TSS Cortex derived primary cultured neurospheres brain
10 chr6:118228000-118230800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
11 chr6:118228200-118230200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:118228200-118230800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:118228800-118230400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
14 chr6:118229000-118230200 Bivalent/Poised TSS Brain Germinal Matrix brain
15 chr6:118229200-118230200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
16 chr6:118229200-118230200 Active TSS Fetal Brain Male brain
17 chr6:118229400-118230200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
18 chr6:118229400-118230400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
19 chr6:118229600-118230200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
20 chr6:118229600-118231800 Weak transcription Aorta Aorta
21 chr6:118229800-118230200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:118229800-118230200 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
23 chr6:118229800-118230200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
24 chr6:118229800-118230200 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
25 chr6:118229800-118230200 Bivalent/Poised TSS Psoas Muscle Psoas
26 chr6:118229800-118230200 Bivalent/Poised TSS NH-A brain
27 chr6:118229800-118230400 Active TSS Brain Hippocampus Middle brain
28 chr6:118229800-118241400 Weak transcription Gastric stomach
29 chr6:118230000-118230200 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
30 chr6:118230000-118230200 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr6:118230000-118230200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr6:118230000-118230200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
33 chr6:118230000-118230200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
34 chr6:118230000-118230200 Bivalent Enhancer Fetal Intestine Small intestine
35 chr6:118230000-118230200 Bivalent Enhancer Fetal Muscle Leg muscle
36 chr6:118230000-118230400 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:118230000-118230400 Active TSS Rectal Smooth Muscle rectum
38 chr6:118230000-118231000 Active TSS Fetal Brain Female brain

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