Variant report

Variant	rs563312372
Chromosome Location	chr1:94251703-94251704
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546822	chr1:94246577-94289863	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv1815663	chr1:94246577-94291252	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1877	chr1:94247756-94292908	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv2442893	chr1:94250205-94251794	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2062392	chr1:94251257-94251961	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3320429	chr1:94251334-94251878	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3320433	chr1:94251390-94251844	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3320428	chr1:94251397-94251848	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3320431	chr1:94251401-94251797	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3320432	chr1:94251445-94251776	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv2595696	chr1:94251459-94251771	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3320434	chr1:94251459-94251781	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv160444	chr1:94251468-94251780	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94220000-94254200	Weak transcription	Aorta	Aorta
2	chr1:94245600-94253000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr1:94246600-94255400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:94246800-94266600	Weak transcription	A549	lung
5	chr1:94249000-94252000	Weak transcription	Hela-S3	cervix
6	chr1:94249000-94263600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:94251000-94252200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr1:94251200-94252200	Weak transcription	HepG2	liver
9	chr1:94251400-94251800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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