Variant report

Variant	rs563331510
Chromosome Location	chr12:10248311-10248312
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898757	chr12:10229281-10614641	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv826239	chr12:10244497-10249249	Flanking Active TSS Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3334215	chr12:10248155-10248339	Weak transcription Flanking Active TSS Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10222800-10248400	Weak transcription	Psoas Muscle	Psoas
2	chr12:10242800-10253800	Weak transcription	Brain Hippocampus Middle	brain
3	chr12:10245200-10248800	Weak transcription	Left Ventricle	heart
4	chr12:10245800-10251800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr12:10246200-10250000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr12:10247200-10249400	Enhancers	HUVEC	blood vessel
7	chr12:10247800-10248600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr12:10247800-10249000	Weak transcription	Right Atrium	heart
9	chr12:10247800-10250000	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr12:10247800-10250200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr12:10247800-10251600	Active TSS	Adipose Nuclei	Adipose
12	chr12:10247800-10252400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr12:10248200-10248600	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr12:10248200-10249600	Active TSS	Duodenum Smooth Muscle	Duodenum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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