The 2.0 version of rSNPBase

Variant report

Variant rs563352611
Chromosome Location chr19:41293729-41293730
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41285000-41303800 Weak transcription Small Intestine intestine
2 chr19:41285000-41304000 Weak transcription Psoas Muscle Psoas
3 chr19:41285200-41295600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr19:41285200-41295600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr19:41285200-41298000 Weak transcription Fetal Lung lung
6 chr19:41285200-41303200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:41285200-41303400 Weak transcription Pancreas Pancrea
8 chr19:41285200-41303600 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:41285200-41303800 Weak transcription Muscle Satellite Cultured Cells --
10 chr19:41285200-41304000 Weak transcription HSMM muscle
11 chr19:41285400-41295600 Weak transcription Right Ventricle heart
12 chr19:41285400-41296800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr19:41285400-41297000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:41285400-41297400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr19:41285400-41297400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr19:41285400-41297600 Weak transcription Stomach Mucosa stomach
17 chr19:41285400-41297800 Weak transcription NHDF-Ad bronchial
18 chr19:41285400-41298000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr19:41285400-41302400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr19:41285400-41303400 Weak transcription H9 Cell Line embryonic stem cell
21 chr19:41285400-41303400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:41285400-41303400 Weak transcription Primary hematopoietic stem cells blood
23 chr19:41285400-41303400 Weak transcription Colon Smooth Muscle Colon
24 chr19:41285400-41303400 Weak transcription HMEC breast
25 chr19:41285400-41303400 Weak transcription Osteobl bone
26 chr19:41285400-41303600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr19:41285400-41303600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr19:41285400-41303600 Weak transcription NHEK skin
29 chr19:41285400-41303800 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr19:41285400-41303800 Weak transcription NH-A brain
31 chr19:41285400-41304000 Weak transcription HSMMtube muscle
32 chr19:41285800-41294200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr19:41286000-41297600 Strong transcription Fetal Intestine Small intestine
34 chr19:41286000-41299200 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr19:41286000-41299400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr19:41286000-41300000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr19:41286000-41303600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr19:41286200-41294400 Strong transcription Primary T cells from cord blood blood
39 chr19:41286200-41303400 Weak transcription K562 blood
40 chr19:41286200-41303800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr19:41286200-41304000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr19:41286400-41295600 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr19:41286400-41303400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr19:41286400-41303400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr19:41286400-41303800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr19:41286600-41294000 Strong transcription Primary B cells from peripheral blood blood
47 chr19:41286600-41296400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr19:41286600-41298400 Strong transcription Spleen Spleen
49 chr19:41286800-41297800 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr19:41286800-41298400 Strong transcription Thymus Thymus

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Last update: Aug 31, 2015