Variant report

Variant	rs563369107
Chromosome Location	chr6:44528325-44528326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527194	chr6:44523591-44534397	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3349781	chr6:44528274-44530622	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44523000-44531000	Weak transcription	Ovary	ovary
2	chr6:44524000-44531000	Weak transcription	Gastric	stomach
3	chr6:44525000-44529200	Enhancers	Pancreas	Pancrea
4	chr6:44526200-44528800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:44526400-44528600	Weak transcription	Fetal Lung	lung
6	chr6:44526600-44528600	Weak transcription	Fetal Thymus	thymus
7	chr6:44526600-44531000	Weak transcription	Right Atrium	heart
8	chr6:44527000-44528800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr6:44527200-44528600	Weak transcription	Primary hematopoietic stem cells	blood
10	chr6:44527600-44528600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr6:44527600-44528600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr6:44527600-44528600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr6:44527600-44528800	Weak transcription	Fetal Brain Male	brain
14	chr6:44527600-44529000	Enhancers	H1 Cell Line	embryonic stem cell
15	chr6:44527600-44535400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:44527800-44528600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr6:44527800-44528800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr6:44527800-44528800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr6:44527800-44529000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr6:44527800-44529000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr6:44528000-44528400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr6:44528000-44528400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr6:44528000-44528600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr6:44528000-44529600	Weak transcription	HUES6 Cell Line	embryonic stem cell
25	chr6:44528000-44532600	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr6:44528200-44528400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
27	chr6:44528200-44528600	Weak transcription	HUES64 Cell Line	embryonic stem cell

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