Variant report

Variant	rs56337759
Chromosome Location	chr2:67190323-67190324
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73935996	0.83[AFR][1000 genomes]
rs73935997	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1008584	chr2:67168244-67703601	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv535775	chr2:67168244-67703601	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67185400-67193400	Weak transcription	Pancreas	Pancrea
2	chr2:67188000-67193400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr2:67188400-67191800	Enhancers	Colon Smooth Muscle	Colon
4	chr2:67188800-67192000	Enhancers	Rectal Smooth Muscle	rectum
5	chr2:67189000-67191400	Enhancers	Fetal Stomach	stomach
6	chr2:67189200-67190400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr2:67189400-67190400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr2:67189400-67191400	Enhancers	Fetal Heart	heart
9	chr2:67189600-67190600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr2:67189600-67190600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr2:67189600-67190800	Enhancers	Placenta Amnion	Placenta Amnion
12	chr2:67189800-67190400	Enhancers	H1 Cell Line	embryonic stem cell
13	chr2:67189800-67190400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr2:67189800-67190600	Enhancers	Fetal Lung	lung
15	chr2:67189800-67190800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr2:67190000-67190400	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr2:67190000-67190400	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr2:67190000-67190400	Enhancers	iPS-20b Cell Line	embryonic stem cell
19	chr2:67190000-67190400	Enhancers	Stomach Smooth Muscle	stomach
20	chr2:67190200-67190400	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr2:67190200-67190600	Enhancers	Duodenum Smooth Muscle	Duodenum

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