Variant report

Variant	rs56339860
Chromosome Location	chr7:101034145-101034146
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SP1	chr7:101033974-101034604	HepG2	liver:	n/a	chr7:101034534-101034544
2	MYBL2	chr7:101033868-101034670	HepG2	liver:	n/a	n/a
3	EBF1	chr7:101034134-101034587	GM12878	blood:	n/a	chr7:101034352-101034362 chr7:101034351-101034362
4	RAD21	chr7:101034093-101034502	HepG2	liver:	n/a	n/a
5	NR2F2	chr7:101033844-101034723	HepG2	liver:	n/a	n/a
6	SP1	chr7:101034085-101034557	GM12878	blood:	n/a	chr7:101034534-101034544
7	EP300	chr7:101034126-101034516	SK-N-SH_RA	brain:	n/a	n/a
8	NR2F2	chr7:101033982-101034659	MCF-7	breast:	n/a	n/a
9	NFIC	chr7:101034118-101034572	HepG2	liver:	n/a	n/a
10	EP300	chr7:101034042-101034491	HepG2	liver:	n/a	n/a
11	HNF4A	chr7:101034079-101034569	HepG2	liver:	n/a	chr7:101034269-101034287 chr7:101034267-101034289 chr7:101034260-101034282 chr7:101034270-101034285 chr7:101034271-101034285
12	POLR2A	chr7:101034139-101034538	HL-60	blood:	n/a	n/a
13	TCF12	chr7:101034091-101034473	HepG2	liver:	n/a	n/a
14	PAX5	chr7:101034014-101034588	GM12878	blood:	n/a	n/a
15	RXRA	chr7:101033961-101034472	HepG2	liver:	n/a	chr7:101034272-101034286
16	MAZ	chr7:101034078-101034518	HepG2	liver:	n/a	n/a
17	IKZF1	chr7:101034092-101034506	GM12878	blood:	n/a	n/a
18	FOXM1	chr7:101034033-101034585	GM12878	blood:	n/a	n/a
19	ZBTB7A	chr7:101034054-101034401	HepG2	liver:	n/a	n/a
20	HNF4A	chr7:101034004-101034560	HepG2	liver:	n/a	chr7:101034269-101034287 chr7:101034267-101034289 chr7:101034260-101034282 chr7:101034270-101034285 chr7:101034271-101034285
21	BCL11A	chr7:101034127-101034558	GM12878	blood:	n/a	n/a
22	EBF1	chr7:101034090-101034584	GM12878	blood:	n/a	chr7:101034352-101034362 chr7:101034351-101034362
23	NR2F2	chr7:101034034-101034464	K562	blood:	n/a	n/a
24	TCF3	chr7:101034141-101034487	GM12878	blood:	n/a	n/a
25	FOXA1	chr7:101034050-101034531	HepG2	liver:	n/a	n/a
26	YY1	chr7:101034055-101034550	HepG2	liver:	n/a	chr7:101034430-101034439
27	RUNX3	chr7:101034066-101034558	GM12878	blood:	n/a	n/a
28	HNF4G	chr7:101033980-101034463	HepG2	liver:	n/a	chr7:101034269-101034287 chr7:101034267-101034289 chr7:101034260-101034282 chr7:101034271-101034286 chr7:101034271-101034285
29	HDAC2	chr7:101034031-101034503	HepG2	liver:	n/a	n/a
30	RXRA	chr7:101034083-101034519	HepG2	liver:	n/a	chr7:101034272-101034286
31	MAX	chr7:101033867-101034608	HepG2	liver:	n/a	n/a
32	MYBL2	chr7:101034022-101034625	HepG2	liver:	n/a	n/a
33	TEAD4	chr7:101033916-101034451	HepG2	liver:	n/a	n/a
34	POLR2A	chr7:101034103-101034594	HL-60	blood:	n/a	n/a
35	HNF4G	chr7:101033980-101034546	HepG2	liver:	n/a	chr7:101034269-101034287 chr7:101034267-101034289 chr7:101034260-101034282 chr7:101034271-101034286 chr7:101034271-101034285
36	FOXA1	chr7:101034020-101034536	HepG2	liver:	n/a	n/a
37	NR2F2	chr7:101033940-101034698	HepG2	liver:	n/a	n/a
38	EP300	chr7:101034126-101034513	HepG2	liver:	n/a	n/a
39	MTA3	chr7:101034021-101034604	GM12878	blood:	n/a	n/a
40	NR2F2	chr7:101034122-101034451	K562	blood:	n/a	n/a
41	ZNF143	chr7:101033974-101034314	H1-hESC	embryonic stem cell:	n/a	n/a
42	HNF4A	chr7:101034042-101034499	HepG2	liver:	n/a	chr7:101034269-101034287 chr7:101034267-101034289 chr7:101034260-101034282 chr7:101034270-101034285 chr7:101034271-101034285
43	ZBTB7A	chr7:101034069-101034522	HepG2	liver:	n/a	n/a
44	FOXA1	chr7:101034062-101034631	HepG2	liver:	n/a	n/a
45	NFIC	chr7:101034074-101034609	GM12878	blood:	n/a	n/a
46	EP300	chr7:101033971-101034597	HepG2	liver:	n/a	n/a
47	POLR2A	chr7:101034100-101034548	GM12892	blood:	n/a	n/a
48	EP300	chr7:101033787-101034832	SK-N-SH	brain:	n/a	n/a
49	NFIC	chr7:101034135-101034540	GM12878	blood:	n/a	n/a
50	RUNX3	chr7:101034079-101034595	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:101032377..101034733-chr7:101037402..101040388,2	MCF-7	breast:
2	chr7:101016391..101018815-chr7:101033017..101035506,2	K562	blood:

Variant related genes	Relation type
ENSG00000233683	TF binding region

Extended variants
information (count: 107 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10255040	0.92[EUR][1000 genomes]
rs11764310	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11770876	0.88[ASN][1000 genomes]
rs13226233	0.87[ASN][1000 genomes]
rs13230781	0.84[ASN][1000 genomes]
rs13230832	0.84[ASN][1000 genomes]
rs13230901	0.84[ASN][1000 genomes]
rs13237806	0.87[ASN][1000 genomes]
rs2410821	0.91[ASN][1000 genomes]
rs2410822	0.87[ASN][1000 genomes]
rs28601817	0.84[EUR][1000 genomes]
rs35671197	0.91[ASN][1000 genomes]
rs35954344	0.84[ASN][1000 genomes]
rs4727485	0.84[ASN][1000 genomes]
rs4729689	0.91[ASN][1000 genomes]
rs4729690	0.84[ASN][1000 genomes]
rs55941500	0.87[ASN][1000 genomes]
rs56198417	0.91[ASN][1000 genomes]
rs56374923	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66703493	0.87[ASN][1000 genomes]
rs6942770	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6944691	0.89[EUR][1000 genomes]
rs6960955	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6976566	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73173771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73179265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73179267	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73182906	0.91[ASN][1000 genomes]
rs73182909	0.89[ASN][1000 genomes]
rs7788586	0.84[ASN][1000 genomes]
rs7788603	0.84[ASN][1000 genomes]
rs7795427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7798303	0.92[EUR][1000 genomes]
rs7805075	0.87[ASN][1000 genomes]
rs9987064	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933653	chr7:100701931-101515782	Active TSS ZNF genes & repeats Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
2	nsv1030604	chr7:100717732-101223465	Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
3	nsv429788	chr7:100799565-101178565	Weak transcription Strong transcription Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
4	esv2752134	chr7:100800131-101141867	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
5	nsv831077	chr7:100874209-101083930	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
6	nsv1023393	chr7:100904333-101102046	Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	esv2752135	chr7:100932330-101135565	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	esv2752136	chr7:100932330-101143259	Genic enhancers Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	nsv1017098	chr7:100935631-101117541	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
10	nsv539042	chr7:100935631-101117541	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
11	esv2752137	chr7:100938008-101135398	ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
12	nsv1028170	chr7:100958058-101117541	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
13	nsv539043	chr7:100958058-101117541	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
14	nsv517175	chr7:100960550-101138286	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
15	nsv1034896	chr7:100961416-101135398	Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
16	nsv1019056	chr7:100961416-101137314	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
17	nsv1024423	chr7:100963863-101128424	Enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
18	nsv1033659	chr7:100963863-101135398	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
19	nsv1018124	chr7:100963863-101137314	Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
20	nsv1017544	chr7:100965601-101116322	Enhancers Active TSS Bivalent/Poised TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
21	nsv1029050	chr7:100965601-101127455	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
22	nsv1017844	chr7:100965601-101128424	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
23	nsv1022477	chr7:100965601-101135398	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
24	nsv1026450	chr7:100965601-101137314	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
25	nsv1030543	chr7:100967086-101116322	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
26	nsv1019282	chr7:100967086-101120515	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
27	nsv1018915	chr7:100967086-101123415	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
28	nsv1016531	chr7:100967086-101127455	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
29	nsv1018135	chr7:100967086-101128424	Bivalent Enhancer Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
30	nsv1019142	chr7:100967086-101135398	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
31	nsv1019605	chr7:100967086-101137314	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
32	nsv1023475	chr7:100967086-101143259	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
33	esv2761351	chr7:100967098-101135398	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
34	nsv1022652	chr7:100968363-101116322	Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
35	nsv1034171	chr7:100968363-101126281	Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
36	esv2829878	chr7:100968363-101127455	Genic enhancers Bivalent Enhancer Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
37	esv2830177	chr7:100968363-101127455	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
38	esv3693369	chr7:100968363-101127455	Bivalent Enhancer Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
39	nsv1024733	chr7:100968363-101127455	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
40	nsv464653	chr7:100968363-101127455	Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
41	nsv464654	chr7:100968363-101127455	Enhancers Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
42	nsv464655	chr7:100968363-101127455	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
43	nsv464656	chr7:100968363-101127455	Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
44	nsv464657	chr7:100968363-101127455	Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
45	nsv464658	chr7:100968363-101127455	Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
46	nsv464659	chr7:100968363-101127455	Bivalent Enhancer Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
47	nsv607980	chr7:100968363-101127455	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
48	nsv1021156	chr7:100968363-101128424	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
49	nsv1018765	chr7:100968363-101135212	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
50	nsv1032481	chr7:100968363-101135398	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101028000-101034200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr7:101030200-101041600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:101030400-101034200	Weak transcription	Placenta	Placenta
4	chr7:101030400-101034200	Weak transcription	Gastric	stomach
5	chr7:101030400-101041600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr7:101030600-101034200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr7:101030600-101034200	Weak transcription	Fetal Lung	lung
8	chr7:101030600-101034400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:101030600-101041600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr7:101030600-101045200	Weak transcription	Right Atrium	heart
11	chr7:101030800-101034400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr7:101032800-101036200	Enhancers	Primary B cells from cord blood	blood
13	chr7:101033000-101035600	Enhancers	HepG2	liver
14	chr7:101033200-101035600	Enhancers	Primary T helper cells PMA-I stimulated	--
15	chr7:101033200-101036000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr7:101033200-101036600	Enhancers	Primary B cells from peripheral blood	blood
17	chr7:101033400-101034600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
18	chr7:101033400-101034800	Enhancers	Liver	Liver
19	chr7:101033400-101035600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr7:101033400-101035600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
21	chr7:101033400-101036000	Enhancers	Primary hematopoietic stem cells	blood
22	chr7:101033400-101036200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr7:101033400-101036200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr7:101033400-101036200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr7:101033400-101036200	Enhancers	Fetal Thymus	thymus
26	chr7:101033400-101036800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr7:101033600-101034200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
28	chr7:101033600-101035400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr7:101033600-101035600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr7:101033600-101035600	Enhancers	Primary T helper naive cells from peripheral blood	blood
31	chr7:101033600-101035600	Enhancers	Primary T helper cells fromperipheralblood	blood
32	chr7:101033600-101035600	Enhancers	Fetal Muscle Leg	muscle
33	chr7:101033600-101036200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr7:101033600-101036200	Enhancers	Primary hematopoietic stem cells short term culture	blood
35	chr7:101033800-101034200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr7:101033800-101034200	Enhancers	Thymus	Thymus
37	chr7:101033800-101034600	Enhancers	NHDF-Ad	bronchial
38	chr7:101033800-101034800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr7:101033800-101034800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
40	chr7:101033800-101035400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
41	chr7:101033800-101035400	Enhancers	Fetal Muscle Trunk	muscle
42	chr7:101033800-101035600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr7:101033800-101036200	Enhancers	H1 Cell Line	embryonic stem cell
44	chr7:101033800-101036200	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr7:101034000-101034200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
46	chr7:101034000-101034400	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr7:101034000-101034400	Enhancers	HUES64 Cell Line	embryonic stem cell
48	chr7:101034000-101034400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr7:101034000-101034400	Flanking Active TSS	Primary T cells from cord blood	blood
50	chr7:101034000-101034400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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