Variant report
Variant | rs563463061 |
---|---|
Chromosome Location | chr10:37238151-37238152 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:4 , 50 per page) page:
1
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CEBPB | chr10:37237949-37238152 | A549 | lung: | n/a | n/a |
2 | CEBPB | chr10:37237972-37238212 | A549 | lung: | n/a | n/a |
3 | FOXA2 | chr10:37237939-37238177 | A549 | lung: | n/a | n/a |
4 | CEBPB | chr10:37237969-37238202 | A549 | lung: | n/a | n/a |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:37235121..37239271-chr11:80409881..80413135,3 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
MKNK2P1 | TF binding region |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1036571 | chr10:37172804-37396508 | Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv1052867 | chr10:37196806-37323802 | Weak transcription Enhancers Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
3 | nsv1046197 | chr10:37200503-37333823 | Enhancers Weak transcription Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv971861 | chr10:37231652-37239745 | Active TSS Enhancers | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | n/a |
5 | nsv6376 | chr10:37234719-37279876 | Active TSS ZNF genes & repeats Enhancers | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
6 | nsv895022 | chr10:37238001-37274522 | Enhancers | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |