Variant report

Variant	rs56347129
Chromosome Location	chr17:46485443-46485444
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11079831	1.00[AFR][1000 genomes]
rs2303489	1.00[AFR][1000 genomes]
rs3744774	1.00[AFR][1000 genomes]
rs3809776	1.00[AFR][1000 genomes]
rs3826540	1.00[AFR][1000 genomes]
rs3826541	1.00[AFR][1000 genomes]
rs8844	1.00[AFR][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46473200-46486200	Weak transcription	Thymus	Thymus
2	chr17:46473600-46486200	Weak transcription	Fetal Thymus	thymus
3	chr17:46475000-46486600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr17:46483000-46486400	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr17:46483800-46485600	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr17:46484200-46486400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr17:46484200-46486800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr17:46484400-46485600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr17:46484400-46485800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
10	chr17:46484600-46486000	Enhancers	Primary T cells from cord blood	blood
11	chr17:46485000-46491200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr17:46485200-46486000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr17:46485200-46486200	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr17:46485200-46486200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr17:46485200-46487000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr17:46485200-46487400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
17	chr17:46485200-46488800	Weak transcription	Primary B cells from peripheral blood	blood
18	chr17:46485400-46486200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr17:46485400-46487400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr17:46485400-46487400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr17:46485400-46488600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr17:46485400-46488800	Weak transcription	GM12878-XiMat	blood

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