The 2.0 version of rSNPBase

Variant report

Variant rs56347659
Chromosome Location chr1:211777405-211777406
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211771600-211786200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr1:211772200-211778000 Enhancers Placenta Placenta
3 chr1:211772600-211780600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:211775200-211777600 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:211775200-211778600 Enhancers Fetal Intestine Small intestine
6 chr1:211775400-211777600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:211775400-211777600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:211775400-211777600 Enhancers Duodenum Mucosa Duodenum
9 chr1:211775400-211777600 Enhancers HMEC breast
10 chr1:211775400-211777600 Enhancers NHEK skin
11 chr1:211775400-211778000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:211775400-211778400 Enhancers Liver Liver
13 chr1:211775400-211778800 Enhancers Primary monocytes fromperipheralblood blood
14 chr1:211776000-211777800 Enhancers K562 blood
15 chr1:211776000-211778400 Weak transcription GM12878-XiMat blood
16 chr1:211776200-211778000 Enhancers Fetal Intestine Large intestine
17 chr1:211776200-211778000 Enhancers Monocytes-CD14+_RO01746 blood
18 chr1:211776200-211779200 Weak transcription Primary hematopoietic stem cells blood
19 chr1:211776400-211779000 Weak transcription Primary B cells from cord blood blood
20 chr1:211776400-211779800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:211776600-211777800 Weak transcription Small Intestine intestine
22 chr1:211776800-211779400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:211776800-211779600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:211777000-211778000 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:211777000-211778400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:211777000-211779200 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:211777000-211779200 Weak transcription Adipose Nuclei Adipose
28 chr1:211777000-211779400 Flanking Active TSS HepG2 liver
29 chr1:211777000-211779800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:211777000-211780600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:211777000-211780600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:211777000-211781000 Weak transcription Stomach Mucosa stomach
33 chr1:211777000-211782600 Weak transcription Hela-S3 cervix
34 chr1:211777000-211786600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:211777200-211779400 Weak transcription Lung lung
36 chr1:211777200-211782600 Weak transcription Osteobl bone
37 chr1:211777200-211786200 Weak transcription NHLF lung
38 chr1:211777400-211777800 Weak transcription A549 lung
39 chr1:211777400-211780600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:211777400-211784200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:211777400-211784200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015