Variant report

Variant	rs563494765
Chromosome Location	chr3:150491258-150491259
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532662	chr3:150180747-150633414	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
2	nsv966961	chr3:150490481-150498929	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150482000-150491600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:150482000-150491800	Weak transcription	Gastric	stomach
3	chr3:150482800-150492600	Weak transcription	Spleen	Spleen
4	chr3:150484200-150498600	Weak transcription	Fetal Intestine Small	intestine
5	chr3:150484800-150493800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:150489200-150492800	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr3:150489200-150493000	Weak transcription	NHDF-Ad	bronchial
8	chr3:150489200-150493200	Weak transcription	Osteobl	bone
9	chr3:150489400-150492600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:150489600-150492600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr3:150489800-150491600	Weak transcription	Left Ventricle	heart
12	chr3:150489800-150491800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr3:150489800-150492600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr3:150489800-150492600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr3:150489800-150492600	Weak transcription	Pancreas	Pancrea
16	chr3:150490000-150491400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr3:150490200-150491400	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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