No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv999738 |
chr1:212218618-212513690 |
Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
36 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1009376 |
chr1:212292357-212680320 |
Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
48 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv549139 |
chr1:212332294-212876902 |
Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
114 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv997629 |
chr1:212404489-212658785 |
Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
45 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv535286 |
chr1:212404489-212658785 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
45 gene(s)
|
inside rSNPs
|
diseases
|
6 |
esv1799093 |
chr1:212447167-212468974 |
Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
7 |
esv1800932 |
chr1:212447167-212468974 |
Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
8 |
esv1839997 |
chr1:212447167-212468974 |
Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv873155 |
chr1:212449195-212502157 |
Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
10 |
esv1835118 |
chr1:212457414-212459623 |
Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
11 |
esv1837179 |
chr1:212457414-212459623 |
Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
12 |
esv1836019 |
chr1:212457414-212460077 |
Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
13 |
esv1839887 |
chr1:212457414-212478047 |
Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
27 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv3442043 |
chr1:212457854-212460702 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Bivalent/Poised TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv549140 |
chr1:212458317-212459257 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
16 |
esv1802324 |
chr1:212458317-212459563 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv549141 |
chr1:212458317-212459563 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
18 |
esv1795459 |
chr1:212458317-212459623 |
Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
19 |
esv1798776 |
chr1:212458317-212459623 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
20 |
esv1799656 |
chr1:212458317-212459623 |
Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
21 |
esv1799768 |
chr1:212458317-212459623 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
22 |
esv1802931 |
chr1:212458317-212459623 |
Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
23 |
esv1840476 |
chr1:212458317-212459623 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
24 |
nsv549142 |
chr1:212458317-212459623 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
25 |
esv1795453 |
chr1:212458317-212459796 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
26 |
esv1834108 |
chr1:212458317-212459796 |
Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
27 |
esv1792430 |
chr1:212458317-212460077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
28 |
esv1796966 |
chr1:212458317-212460077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
29 |
esv1801167 |
chr1:212458317-212460077 |
ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
30 |
esv18594 |
chr1:212458325-212460102 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
31 |
nsv549143 |
chr1:212458383-212459563 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
32 |
nsv549144 |
chr1:212458542-212459563 |
Active TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
26 gene(s)
|
inside rSNPs
|
diseases
|
33 |
esv1840875 |
chr1:212458542-212459623 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
26 gene(s)
|
inside rSNPs
|
diseases
|
34 |
esv1842442 |
chr1:212458542-212459623 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
26 gene(s)
|
inside rSNPs
|
diseases
|
35 |
nsv549145 |
chr1:212458542-212459623 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
26 gene(s)
|
inside rSNPs
|
diseases
|