Variant report

Variant	rs563513606
Chromosome Location	chr8:129852621-129852622
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv612212	chr8:129851646-129861039	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv612213	chr8:129851646-129862009	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv612214	chr8:129851646-129862252	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129843800-129863600	Weak transcription	Dnd41	blood
2	chr8:129848000-129857200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:129849600-129853000	Enhancers	NHDF-Ad	bronchial
4	chr8:129849600-129854800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:129850800-129853400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr8:129851000-129853400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr8:129852000-129853600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr8:129852200-129853400	Enhancers	Osteobl	bone
9	chr8:129852200-129853600	Enhancers	Muscle Satellite Cultured Cells	--
10	chr8:129852200-129857200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr8:129852400-129853400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr8:129852400-129853400	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr8:129852400-129853400	Enhancers	HSMM	muscle
14	chr8:129852400-129853400	Enhancers	NHLF	lung
15	chr8:129852400-129853600	Enhancers	HSMMtube	muscle
16	chr8:129852400-129853800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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