The 2.0 version of rSNPBase

Variant report

Variant rs563687570
Chromosome Location chr5:127410423-127410424
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127333600-127417800 Weak transcription Pancreas Pancrea
2 chr5:127356400-127414000 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr5:127374600-127418000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr5:127375200-127414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr5:127376400-127414400 Weak transcription Dnd41 blood
6 chr5:127377200-127414200 Weak transcription K562 blood
7 chr5:127378000-127416600 Weak transcription Spleen Spleen
8 chr5:127378400-127414200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr5:127378800-127415800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr5:127379000-127417400 Weak transcription Fetal Muscle Trunk muscle
11 chr5:127380200-127414600 Weak transcription Primary hematopoietic stem cells blood
12 chr5:127380200-127416200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr5:127386400-127414400 Weak transcription Colon Smooth Muscle Colon
14 chr5:127386600-127417000 Weak transcription Adipose Nuclei Adipose
15 chr5:127389200-127414400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr5:127389400-127414600 Weak transcription Stomach Smooth Muscle stomach
17 chr5:127389600-127417000 Weak transcription Fetal Heart heart
18 chr5:127389800-127416200 Weak transcription Thymus Thymus
19 chr5:127390200-127415400 Weak transcription Primary T cells fromperipheralblood blood
20 chr5:127390200-127417600 Weak transcription Psoas Muscle Psoas
21 chr5:127390400-127414200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr5:127390400-127416600 Weak transcription Fetal Stomach stomach
23 chr5:127390600-127415000 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr5:127391000-127417600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr5:127391200-127414400 Weak transcription A549 lung
26 chr5:127391400-127414800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr5:127391400-127416600 Weak transcription Fetal Muscle Leg muscle
28 chr5:127392200-127414400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr5:127394200-127418000 Weak transcription Lung lung
30 chr5:127394600-127416800 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr5:127396000-127417000 Weak transcription Ovary ovary
32 chr5:127396200-127416200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr5:127396400-127413000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr5:127396400-127414400 Weak transcription Primary T cells from cord blood blood
35 chr5:127398200-127416200 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr5:127398400-127414400 Weak transcription NHDF-Ad bronchial
37 chr5:127398400-127414600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr5:127398400-127415800 Weak transcription Rectal Smooth Muscle rectum
39 chr5:127398400-127416200 Weak transcription HSMMtube muscle
40 chr5:127398400-127417400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:127398600-127414400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr5:127398600-127416600 Weak transcription Osteobl bone
43 chr5:127399000-127412400 Weak transcription HMEC breast
44 chr5:127399000-127413000 Weak transcription Small Intestine intestine
45 chr5:127399000-127414400 Weak transcription Brain Angular Gyrus brain
46 chr5:127399000-127414400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr5:127399000-127415600 Weak transcription Brain Cingulate Gyrus brain
48 chr5:127399000-127417400 Weak transcription HSMM muscle
49 chr5:127399200-127412400 Weak transcription NHEK skin
50 chr5:127399200-127414400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015