Variant report

Variant	rs563735760
Chromosome Location	chr9:85220211-85220212
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831641	chr9:85145561-85309589	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3431733	chr9:85220100-85220333	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85213400-85221000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr9:85216000-85220600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr9:85216200-85220800	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr9:85217200-85221200	Weak transcription	Fetal Heart	heart
5	chr9:85219600-85220400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr9:85219600-85220800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr9:85219600-85220800	Enhancers	Fetal Intestine Small	intestine
8	chr9:85219600-85221200	Enhancers	Fetal Stomach	stomach
9	chr9:85219600-85221400	Enhancers	Colon Smooth Muscle	Colon
10	chr9:85219600-85221400	Enhancers	Fetal Intestine Large	intestine
11	chr9:85219600-85221800	Enhancers	Liver	Liver
12	chr9:85219600-85221800	Enhancers	Fetal Kidney	kidney
13	chr9:85219600-85222000	Enhancers	Fetal Lung	lung
14	chr9:85219800-85220400	Enhancers	Fetal Muscle Leg	muscle
15	chr9:85219800-85220600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:85220000-85220400	Weak transcription	Pancreas	Pancrea
17	chr9:85220000-85221200	Enhancers	Rectal Smooth Muscle	rectum
18	chr9:85220200-85220400	Flanking Active TSS	HepG2	liver
19	chr9:85220200-85221600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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