Variant report

Variant	rs563738662
Chromosome Location	chr5:107338511-107338512
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882682	chr5:107213361-107458336	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv327830	chr5:107337906-107340794	Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:107319800-107354000	Weak transcription	Primary B cells from cord blood	blood
2	chr5:107321200-107338800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr5:107327400-107353400	Weak transcription	Aorta	Aorta
4	chr5:107333800-107338800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr5:107333800-107338800	Weak transcription	Fetal Brain Male	brain
6	chr5:107334200-107338600	Weak transcription	HUVEC	blood vessel
7	chr5:107336800-107338600	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr5:107338400-107338800	Enhancers	GM12878-XiMat	blood
9	chr5:107338400-107338800	Enhancers	NHDF-Ad	bronchial
10	chr5:107338400-107339000	Active TSS	Osteobl	bone
11	chr5:107338400-107339400	Flanking Active TSS	Dnd41	blood
12	chr5:107338400-107339600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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