Variant report

Variant	rs563818272
Chromosome Location	chr6:28156212-28156213
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883514	chr6:28155418-28185726	Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28155000-28156800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
2	chr6:28155000-28157800	ZNF genes & repeats	Liver	Liver
3	chr6:28155200-28157200	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
4	chr6:28155200-28157400	ZNF genes & repeats	Adipose Nuclei	Adipose
5	chr6:28155200-28158000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:28155800-28156800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:28155800-28157000	ZNF genes & repeats	Aorta	Aorta
8	chr6:28156200-28157000	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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