Variant report

Variant	rs563843060
Chromosome Location	chr16:81832738-81832739
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948448	chr16:81198147-81906766	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
2	nsv573365	chr16:81804972-81975892	Strong transcription Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv2761926	chr16:81830475-81835109	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1067307	chr16:81832031-81851736	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:81818000-81845000	Genic enhancers	Primary B cells from peripheral blood	blood
2	chr16:81819800-81848800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr16:81827800-81841800	Weak transcription	Fetal Intestine Small	intestine
4	chr16:81828800-81832800	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr16:81828800-81833600	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr16:81829200-81842400	Weak transcription	Pancreas	Pancrea
7	chr16:81829400-81835200	Enhancers	Primary hematopoietic stem cells	blood
8	chr16:81829600-81832800	Enhancers	Placenta	Placenta
9	chr16:81829800-81833200	Enhancers	Primary T cells fromperipheralblood	blood
10	chr16:81830200-81834200	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr16:81830800-81832800	Flanking Active TSS	GM12878-XiMat	blood
12	chr16:81830800-81842400	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr16:81831000-81834400	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr16:81831400-81832800	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr16:81831600-81833000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
16	chr16:81831800-81832800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr16:81831800-81832800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr16:81831800-81832800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr16:81831800-81832800	Enhancers	Adipose Nuclei	Adipose
20	chr16:81831800-81832800	Enhancers	Brain Substantia Nigra	brain
21	chr16:81831800-81832800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr16:81831800-81832800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
23	chr16:81831800-81833000	Flanking Active TSS	Primary B cells from cord blood	blood
24	chr16:81831800-81833000	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr16:81831800-81833000	Enhancers	Duodenum Mucosa	Duodenum
26	chr16:81831800-81833000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
27	chr16:81832000-81832800	Enhancers	H1 Cell Line	embryonic stem cell
28	chr16:81832000-81832800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr16:81832000-81832800	Enhancers	HUES6 Cell Line	embryonic stem cell
30	chr16:81832000-81832800	Enhancers	Primary T killer memory cells from peripheral blood	blood
31	chr16:81832000-81833000	Flanking Active TSS	Thymus	Thymus
32	chr16:81832200-81832800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr16:81832200-81832800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr16:81832200-81832800	Flanking Active TSS	Fetal Thymus	thymus
35	chr16:81832200-81832800	Flanking Active TSS	Right Atrium	heart
36	chr16:81832400-81833000	Enhancers	Primary T helper cells fromperipheralblood	blood
37	chr16:81832400-81842400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr16:81832600-81837800	Weak transcription	Rectal Mucosa Donor 29	rectum
39	chr16:81832600-81838000	Weak transcription	Lung	lung
40	chr16:81832600-81840000	Weak transcription	Spleen	Spleen

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