The 2.0 version of rSNPBase

Variant report

Variant rs563853429
Chromosome Location chr11:76289335-76289336
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:76282800-76291000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr11:76285200-76290000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr11:76285600-76291600 Enhancers Placenta Placenta
4 chr11:76285800-76292200 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr11:76286000-76289800 Weak transcription Ovary ovary
6 chr11:76287000-76289800 Weak transcription Aorta Aorta
7 chr11:76287000-76291000 Enhancers Fetal Stomach stomach
8 chr11:76287000-76291400 Enhancers Placenta Amnion Placenta Amnion
9 chr11:76287400-76291200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:76287800-76289400 Enhancers Duodenum Smooth Muscle Duodenum
11 chr11:76287800-76289600 Enhancers HUVEC blood vessel
12 chr11:76287800-76289600 Enhancers Osteobl bone
13 chr11:76287800-76291000 Enhancers Muscle Satellite Cultured Cells --
14 chr11:76287800-76291200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr11:76287800-76291200 Enhancers Left Ventricle heart
16 chr11:76288000-76289600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr11:76288000-76289600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:76288000-76289600 Enhancers Spleen Spleen
19 chr11:76288000-76290000 Enhancers HMEC breast
20 chr11:76288000-76290400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr11:76288000-76290600 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr11:76288000-76290600 Enhancers Stomach Smooth Muscle stomach
23 chr11:76288000-76290800 Enhancers NH-A brain
24 chr11:76288000-76291000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr11:76288000-76291200 Enhancers NHDF-Ad bronchial
26 chr11:76288000-76291600 Enhancers HUES6 Cell Line embryonic stem cell
27 chr11:76288200-76289600 Enhancers Fetal Intestine Large intestine
28 chr11:76288200-76289800 Enhancers Adipose Nuclei Adipose
29 chr11:76288200-76291000 Enhancers Fetal Kidney kidney
30 chr11:76288200-76291000 Enhancers NHLF lung
31 chr11:76288200-76291200 Enhancers Fetal Muscle Trunk muscle
32 chr11:76288200-76291200 Enhancers Fetal Muscle Leg muscle
33 chr11:76288200-76291400 Enhancers Skeletal Muscle Female skeletal muscle
34 chr11:76288200-76291600 Enhancers Right Atrium heart
35 chr11:76288400-76289400 Enhancers Fetal Intestine Small intestine
36 chr11:76288400-76289800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr11:76288400-76290000 Enhancers Skeletal Muscle Male skeletal muscle
38 chr11:76288400-76290400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr11:76288400-76290400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:76288400-76291200 Enhancers Esophagus oesophagus
41 chr11:76288600-76289400 Flanking Active TSS NHEK skin
42 chr11:76288600-76289600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:76288600-76289600 Enhancers Stomach Mucosa stomach
44 chr11:76288600-76289800 Enhancers Right Ventricle heart
45 chr11:76288600-76291200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr11:76288600-76291600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr11:76288800-76289800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr11:76288800-76290600 Weak transcription Duodenum Mucosa Duodenum
49 chr11:76288800-76290600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr11:76289000-76289400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015