The 2.0 version of rSNPBase

Variant report

Variant rs56386937
Chromosome Location chr5:35635031-35635032
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35618600-35646800 Weak transcription Spleen Spleen
2 chr5:35618600-35653800 Weak transcription Lung lung
3 chr5:35618600-35678000 Weak transcription Left Ventricle heart
4 chr5:35619000-35638000 Weak transcription Colon Smooth Muscle Colon
5 chr5:35619000-35644200 Weak transcription Brain Hippocampus Middle brain
6 chr5:35619000-35651400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:35619000-35651600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr5:35619000-35652000 Weak transcription Rectal Smooth Muscle rectum
9 chr5:35619200-35635400 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr5:35619200-35637600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:35619200-35639000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:35619200-35644000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:35619200-35645800 Weak transcription Small Intestine intestine
14 chr5:35619200-35646000 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:35619200-35649800 Weak transcription Hela-S3 cervix
16 chr5:35619200-35651400 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr5:35619400-35652200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr5:35625600-35650000 Weak transcription Right Ventricle heart
19 chr5:35627200-35656600 Weak transcription Osteobl bone
20 chr5:35630400-35662400 Weak transcription Aorta Aorta
21 chr5:35630600-35642800 Weak transcription Fetal Stomach stomach
22 chr5:35630600-35663400 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr5:35630600-35707600 Weak transcription Pancreas Pancrea
24 chr5:35631800-35635400 ZNF genes & repeats Dnd41 blood
25 chr5:35631800-35635800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr5:35632000-35643200 Weak transcription Fetal Kidney kidney
27 chr5:35632600-35639000 Weak transcription Ovary ovary
28 chr5:35632600-35644000 Weak transcription Brain Angular Gyrus brain
29 chr5:35632600-35652400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr5:35633200-35635400 ZNF genes & repeats Liver Liver
31 chr5:35633400-35642000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr5:35634200-35635200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
33 chr5:35634200-35636000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr5:35634400-35635200 ZNF genes & repeats Primary T cells from cord blood blood
35 chr5:35634400-35635400 Weak transcription A549 lung
36 chr5:35634400-35635800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr5:35634600-35635600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr5:35634800-35637600 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr5:35634800-35638200 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr5:35634800-35644200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr5:35634800-35644200 Weak transcription Duodenum Mucosa Duodenum
42 chr5:35634800-35644600 Weak transcription Fetal Lung lung
43 chr5:35634800-35651200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr5:35634800-35651200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr5:35634800-35658200 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr5:35634800-35658200 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr5:35634800-35673200 Weak transcription Brain Anterior Caudate brain
48 chr5:35635000-35635800 Strong transcription Primary hematopoietic stem cells blood
49 chr5:35635000-35636800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr5:35635000-35652000 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015