Variant report

Variant	rs563928512
Chromosome Location	chr1:76490440-76490441
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998499	chr1:76361784-76598712	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2754129	chr1:76489579-76529279	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv870968	chr1:76490234-76552475	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76487400-76491000	Enhancers	Fetal Lung	lung
2	chr1:76488200-76491800	Enhancers	Primary T cells from cord blood	blood
3	chr1:76488800-76490600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr1:76489000-76490600	Enhancers	NHEK	skin
5	chr1:76489200-76490600	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr1:76489200-76490600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr1:76489200-76490800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr1:76489200-76490800	Enhancers	HMEC	breast
9	chr1:76489400-76490600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr1:76489400-76490800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr1:76489400-76490800	Enhancers	Fetal Heart	heart
12	chr1:76489600-76491200	Enhancers	Fetal Stomach	stomach
13	chr1:76489800-76490600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr1:76489800-76491000	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr1:76489800-76491000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr1:76489800-76502800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr1:76490200-76490600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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