Variant report

Variant	rs564010907
Chromosome Location	chr3:155370537-155370538
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009618	chr3:155370034-155492177	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155357400-155379000	Weak transcription	Gastric	stomach
2	chr3:155365400-155375000	Weak transcription	Fetal Thymus	thymus
3	chr3:155365400-155375000	Weak transcription	Thymus	Thymus
4	chr3:155366600-155379000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr3:155366600-155379000	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr3:155367400-155376800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:155368600-155370600	Enhancers	Stomach Mucosa	stomach
8	chr3:155369800-155370600	Enhancers	Brain Anterior Caudate	brain
9	chr3:155369800-155370600	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr3:155370000-155370800	Enhancers	Fetal Stomach	stomach
11	chr3:155370200-155374200	Weak transcription	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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