The 2.0 version of rSNPBase

Variant report

Variant rs564036911
Chromosome Location chr1:171294392-171294393
allele -/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171283600-171297800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr1:171284000-171294600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:171284000-171295200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:171284000-171295400 Weak transcription Stomach Mucosa stomach
5 chr1:171284000-171312200 Weak transcription Brain Hippocampus Middle brain
6 chr1:171284200-171294400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:171284200-171294600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:171284200-171295400 Weak transcription Esophagus oesophagus
9 chr1:171284200-171295800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:171284200-171307400 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:171284200-171313600 Weak transcription Right Ventricle heart
12 chr1:171284200-171313800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:171286800-171309200 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:171288400-171313000 Weak transcription Gastric stomach
15 chr1:171288600-171299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:171288600-171303000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:171288600-171303800 Weak transcription Fetal Muscle Leg muscle
18 chr1:171288600-171312400 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:171289400-171299400 Weak transcription Stomach Smooth Muscle stomach
20 chr1:171289400-171301000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:171289400-171309600 Weak transcription Primary B cells from cord blood blood
22 chr1:171289400-171313400 Weak transcription Fetal Lung lung
23 chr1:171289600-171294800 Weak transcription Primary hematopoietic stem cells blood
24 chr1:171289600-171295600 Weak transcription Lung lung
25 chr1:171289600-171309000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:171289600-171309000 Weak transcription Pancreas Pancrea
27 chr1:171289600-171313000 Weak transcription Adipose Nuclei Adipose
28 chr1:171289800-171298000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:171289800-171298000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:171289800-171298200 Weak transcription Aorta Aorta
31 chr1:171289800-171299600 Weak transcription Rectal Smooth Muscle rectum
32 chr1:171289800-171300200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:171289800-171300600 Weak transcription Primary T cells from cord blood blood
34 chr1:171289800-171309000 Weak transcription Spleen Spleen
35 chr1:171289800-171309200 Weak transcription Left Ventricle heart
36 chr1:171289800-171312600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:171289800-171313000 Weak transcription Duodenum Mucosa Duodenum
38 chr1:171290000-171308200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:171290000-171309200 Weak transcription Ovary ovary
40 chr1:171290200-171296000 Weak transcription Fetal Intestine Large intestine
41 chr1:171292200-171297000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:171293400-171294400 Weak transcription Fetal Heart heart
43 chr1:171293400-171295000 Weak transcription Fetal Intestine Small intestine
44 chr1:171294200-171296200 Weak transcription Liver Liver

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Last update: Aug 31, 2015