Variant report

Variant rs564051486
Chromosome Location chr5:176924522-176924523
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:176922200-176925400 Active TSS Aorta Aorta
2 chr5:176923000-176924600 Flanking Active TSS Colonic Mucosa Colon
3 chr5:176923000-176924800 Active TSS Brain Hippocampus Middle brain
4 chr5:176923000-176925000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:176923000-176925200 Active TSS Brain Angular Gyrus brain
6 chr5:176923000-176925200 Active TSS Left Ventricle heart
7 chr5:176923000-176925600 Active TSS Brain Anterior Caudate brain
8 chr5:176923200-176925000 Active TSS Gastric stomach
9 chr5:176923200-176925000 Active TSS A549 lung
10 chr5:176923200-176925000 Active TSS NHDF-Ad bronchial
11 chr5:176923200-176925200 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr5:176923200-176925200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:176923200-176925600 Active TSS ES-WA7 Cell Line embryonic stem cell
14 chr5:176923200-176925600 Active TSS H9 Cell Line embryonic stem cell
15 chr5:176923200-176925600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
16 chr5:176923200-176925600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr5:176923400-176924800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:176923400-176924800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr5:176923400-176925000 Active TSS HUES64 Cell Line embryonic stem cell
20 chr5:176923400-176925000 Active TSS NH-A brain
21 chr5:176923400-176925200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:176923400-176925200 Active TSS iPS-15b Cell Line embryonic stem cell
23 chr5:176923400-176925200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr5:176923400-176925200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr5:176923400-176925200 Active TSS Rectal Smooth Muscle rectum
26 chr5:176923400-176925400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
27 chr5:176923400-176925400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr5:176923400-176925400 Flanking Active TSS Dnd41 blood
29 chr5:176923400-176925600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr5:176923400-176925600 Active TSS Fetal Kidney kidney
31 chr5:176923600-176924600 Transcr. at gene 5' and 3' Right Atrium heart
32 chr5:176923600-176924800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr5:176923600-176924800 Active TSS Brain Substantia Nigra brain
34 chr5:176923600-176924800 Active TSS Fetal Lung lung
35 chr5:176923600-176924800 Active TSS Right Ventricle heart
36 chr5:176923600-176924800 Active TSS Thymus Thymus
37 chr5:176923600-176925000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr5:176923600-176925000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:176923600-176925000 Active TSS Breast Myoepithelial Primary Cells Breast
40 chr5:176923600-176925000 Active TSS GM12878-XiMat blood
41 chr5:176923600-176925000 Active TSS HepG2 liver
42 chr5:176923600-176925000 Active TSS Osteobl bone
43 chr5:176923600-176925200 Active TSS iPS-18 Cell Line embryonic stem cell
44 chr5:176923600-176925200 Active TSS iPS-20b Cell Line embryonic stem cell
45 chr5:176923600-176925200 Active TSS Psoas Muscle Psoas
46 chr5:176923600-176925600 Flanking Active TSS Primary hematopoietic stem cells blood
47 chr5:176923600-176925600 Active TSS Colon Smooth Muscle Colon
48 chr5:176923600-176925800 Active TSS HSMM muscle
49 chr5:176923800-176924600 Active TSS Brain Germinal Matrix brain
50 chr5:176923800-176924600 Active TSS Fetal Muscle Trunk muscle

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