Variant report

Variant	rs56411742
Chromosome Location	chr5:9544638-9544639
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EGR1	chr5:9544564-9544760	GM12878	blood:	n/a	chr5:9544690-9544705 chr5:9544688-9544702 chr5:9544627-9544637 chr5:9544691-9544704 chr5:9544691-9544704 chr5:9544690-9544704
2	RAD21	chr5:9544420-9544959	GM12878	blood:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
3	HDAC2	chr5:9544506-9546272	MCF-7	breast:	n/a	chr5:9545888-9545897 chr5:9545219-9545233
4	EGR1	chr5:9544508-9544839	K562	blood:	n/a	chr5:9544690-9544705 chr5:9544688-9544702 chr5:9544627-9544637 chr5:9544691-9544704 chr5:9544691-9544704 chr5:9544690-9544704
5	RAD21	chr5:9544522-9544918	HepG2	liver:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
6	FOXM1	chr5:9544552-9544942	GM12878	blood:	n/a	n/a
7	FOXM1	chr5:9544362-9544947	GM12878	blood:	n/a	n/a
8	YY1	chr5:9544612-9544920	GM12891	blood:	n/a	chr5:9544752-9544766
9	FOXP2	chr5:9544607-9544956	SK-N-MC	brain:	n/a	n/a
10	CTCF	chr5:9544632-9544910	MCF-7	breast:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
11	MAX	chr5:9544618-9544813	K562	blood:	n/a	n/a
12	POLR2A	chr5:9544592-9545021	H1-neurons	neurons:	n/a	n/a
13	GATA2	chr5:9544426-9544968	SH-SY5Y	brain:	n/a	n/a
14	CTCF	chr5:9544612-9544967	GM19238	blood:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
15	RAD21	chr5:9544467-9544958	SK-N-SH_RA	brain:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
16	EGR1	chr5:9544525-9544947	H1-hESC	embryonic stem cell:	n/a	chr5:9544690-9544705 chr5:9544688-9544702 chr5:9544627-9544637 chr5:9544691-9544704 chr5:9544691-9544704 chr5:9544690-9544704
17	EP300	chr5:9544504-9545004	H1-hESC	embryonic stem cell:	n/a	chr5:9544916-9544932
18	CTCF	chr5:9544621-9544945	Kidney_OC	kidney:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
19	STAT5A	chr5:9544443-9545007	GM12878	blood:	n/a	chr5:9544847-9544859
20	RAD21	chr5:9544392-9545164	MCF-7	breast:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
21	MAX	chr5:9544587-9545088	A549	lung:	n/a	n/a
22	CTCF	chr5:9544630-9544881	SK-N-SH_RA	brain:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
23	RAD21	chr5:9544383-9544966	SK-N-SH_RA	brain:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
24	CTCF	chr5:9544613-9544927	GM13977	blood:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
25	BCLAF1	chr5:9544506-9544898	GM12878	blood:	n/a	chr5:9544754-9544767
26	RAD21	chr5:9544564-9544931	K562	blood:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
27	JUN	chr5:9544567-9544894	K562	blood:	n/a	n/a
28	RAD21	chr5:9544501-9544976	A549	lung:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
29	CTCF	chr5:9544624-9544910	K562	blood:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
30	CTCF	chr5:9544632-9544917	LNCaP	prostate:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
31	CTCF	chr5:9544577-9544925	SK-N-SH_RA	brain:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
32	CTCF	chr5:9544610-9544972	GM19239	blood:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
33	CTCF	chr5:9544565-9545028	MCF-7	breast:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
34	POLR2A	chr5:9544341-9545082	GM12892	blood:	n/a	n/a
35	PAX5	chr5:9544573-9544918	GM12892	blood:	n/a	n/a
36	RAD21	chr5:9544531-9544914	HepG2	liver:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
37	SP4	chr5:9544541-9544932	H1-hESC	embryonic stem cell:	n/a	chr5:9544688-9544704
38	ZMIZ1	chr5:9544575-9544887	K562	blood:	n/a	n/a
39	SMC3	chr5:9544371-9545177	GM12878	blood:	n/a	chr5:9544604-9544611 chr5:9544756-9544770 chr5:9544756-9544766
40	BHLHE40	chr5:9544301-9544931	GM12878	blood:	n/a	chr5:9544752-9544768 chr5:9544912-9544928
41	ELF1	chr5:9544610-9544834	K562	blood:	n/a	chr5:9544812-9544824
42	RAD21	chr5:9544463-9544972	A549	lung:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
43	POLR2A	chr5:9544624-9545394	H1-hESC	embryonic stem cell:	n/a	n/a
44	CTCF	chr5:9544594-9545064	K562	blood:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
45	POLR2A	chr5:9544638-9545183	H1-hESC	embryonic stem cell:	n/a	n/a
46	TCF12	chr5:9544637-9544830	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTCF	chr5:9544522-9544974	HepG2	liver:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772
48	YY1	chr5:9544615-9544887	GM12878	blood:	n/a	chr5:9544752-9544766
49	RAD21	chr5:9544467-9545038	ECC-1	luminal epithelium:	n/a	chr5:9544752-9544771 chr5:9544754-9544766 chr5:9544756-9544766
50	CTCF	chr5:9544578-9544998	A549	lung:	n/a	chr5:9544755-9544771 chr5:9544756-9544769 chr5:9544756-9544769 chr5:9544754-9544772

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:9544630-9544680	HEEpiC	esophagus:	n/a
2	chr5:9544630-9544680	HPAEpiC	pulmonary alveolar:	n/a
3	chr5:9544630-9544680	Jurkat	blood:	n/a
4	chr5:9544630-9544680	SKMC	muscle:	n/a
5	chr5:9544630-9544680	GM12892	blood:	n/a
6	chr5:9544630-9544680	SK-N-SH	brain:	n/a
7	chr5:9544630-9544680	Hepatocyte	liver:	n/a
8	chr5:9544630-9544680	PANC-1	pancreas:	n/a
9	chr5:9544630-9544680	H1-hESC	embryonic stem cell:	embryo
10	chr5:9544630-9544680	T-47D	breast:	n/a
11	chr5:9544630-9544680	AG09319	gingival:	n/a
12	chr5:9544630-9544680	GM12891	blood:	n/a
13	chr5:9544630-9544680	HCF	heart:	n/a
14	chr5:9544630-9544680	PrEC	prostate:	n/a
15	chr5:9544630-9544680	NB4	blood:	n/a
16	chr5:9544630-9544680	AG04449	skin:	fetal
17	chr5:9544630-9544680	HRE	kidney:	n/a
18	chr5:9544630-9544680	SAEC	small airway:	n/a
19	chr5:9544630-9544680	RPTEC	kidney:	n/a
20	chr5:9544630-9544680	HRPEpiC	eye:	n/a
21	chr5:9544630-9544680	GM06990	blood:	n/a
22	chr5:9544630-9544680	HepG2	liver:	n/a
23	chr5:9544630-9544680	GM19239	blood:	n/a
24	chr5:9544630-9544680	HCM	heart:	n/a
25	chr5:9544630-9544680	Hela-S3	cervix:	n/a
26	chr5:9544630-9544680	A549	lung:	n/a
27	chr5:9544630-9544680	CMK	blood:	n/a
28	chr5:9544630-9544680	SK-N-MC	brain:	n/a
29	chr5:9544630-9544680	HRCEpiC	kidney:	n/a
30	chr5:9544630-9544680	HL-60	blood:	n/a
31	chr5:9544630-9544680	LNCaP	prostate:	n/a
32	chr5:9544630-9544680	HIPEpiC	eye:	n/a
33	chr5:9544630-9544680	BE2_C	brain:	n/a
34	chr5:9544630-9544680	NHDF-neo	bronchial:	n/a
35	chr5:9544630-9544680	IMR90	lung:	fetal
36	chr5:9544630-9544680	K562	blood:	n/a
37	chr5:9544630-9544680	Caco-2	colon:	n/a
38	chr5:9544630-9544680	AoSMC	blood vessel:	n/a
39	chr5:9544630-9544680	U87	brain:	n/a
40	chr5:9544630-9544680	ovcar-3	ovarian:	n/a
41	chr5:9544630-9544680	BJ	skin:	n/a
42	chr5:9544630-9544680	HUVEC	blood vessel:	n/a
43	chr5:9544630-9544680	HEK293	kidney:	embryo
44	chr5:9544630-9544680	PFSK-1	brain:	n/a
45	chr5:9544630-9544680	HCPEpiC	choroid plexus:	n/a
46	chr5:9544630-9544680	NHBE	bronchial:	n/a
47	chr5:9544630-9544680	HMEC	breast:	n/a
48	chr5:9544630-9544680	HAEpiC	amniotic membrane:	n/a
49	chr5:9544630-9544680	GM12878	blood:	n/a
50	chr5:9544630-9544680	NH-A	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:7896681..7897358-chr5:9544262..9544852,2	K562	blood:
2	chr5:9543479..9545232-chr5:9559885..9561800,2	MCF-7	breast:
3	chr5:9516858..9517435-chr5:9544318..9545210,4	MCF-7	breast:
4	chr5:9522895..9524468-chr5:9544584..9546294,2	MCF-7	breast:
5	chr5:9361616..9362826-chr5:9543590..9545181,8	MCF-7	breast:
6	chr5:9516481..9517369-chr5:9544330..9545219,4	MCF-7	breast:

Variant related genes	Relation type
SNHG18	TF binding region
SNORD123	TF binding region
SNHG18	CpG island
SNORD123	CpG island
ENSG00000250001	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11951006	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs11951779	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs11958229	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17262778	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17263150	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17263917	0.86[AFR][1000 genomes]
rs17328408	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17328863	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17328904	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17328932	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs55891419	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv881438	chr5:8728874-9695667	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
2	nsv1015378	chr5:9053542-9617963	Genic enhancers Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
3	nsv537640	chr5:9053542-9617963	Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
4	nsv597071	chr5:9182376-9760599	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
5	nsv1032672	chr5:9182409-9843893	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
6	nsv1035075	chr5:9182584-9843723	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
7	nsv537641	chr5:9182584-9843723	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
8	nsv1034637	chr5:9182784-9741743	Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv537642	chr5:9182784-9741743	Enhancers Genic enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv1028656	chr5:9196001-9837040	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
11	nsv1016885	chr5:9218932-9575594	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
12	nsv1026078	chr5:9222811-9591290	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
13	nsv1022137	chr5:9225121-9745434	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
14	nsv537643	chr5:9225121-9745434	Genic enhancers Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
15	nsv1022574	chr5:9314645-9647238	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
16	nsv869120	chr5:9491731-10149255	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
17	nsv1018275	chr5:9504897-9560199	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
18	nsv537644	chr5:9504897-9560199	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
19	nsv597073	chr5:9533854-9550642	Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
20	esv1824536	chr5:9539540-9546237	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
21	esv1817081	chr5:9539540-9546451	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
22	nsv597074	chr5:9541866-9546412	Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
23	nsv597075	chr5:9542529-9546412	Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
24	esv1803881	chr5:9542529-9546451	Bivalent/Poised TSS Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
25	nsv597076	chr5:9542529-9546451	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
26	nsv1023329	chr5:9543307-9731720	Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs56411742	CTD-2001E22.2	cis	Muscle Skeletal	GTEx

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:9529600-9544800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:9530400-9544800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr5:9542800-9547200	Active TSS	Breast Myoepithelial Primary Cells	Breast
4	chr5:9542800-9548400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr5:9543000-9545000	Active TSS	Brain Germinal Matrix	brain
6	chr5:9543000-9545200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr5:9543000-9547200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr5:9543000-9547200	Active TSS	Brain Inferior Temporal Lobe	brain
9	chr5:9543000-9547800	Active TSS	Brain Hippocampus Middle	brain
10	chr5:9543000-9548200	Active TSS	Aorta	Aorta
11	chr5:9543200-9545400	Active TSS	Brain Anterior Caudate	brain
12	chr5:9543200-9547200	Active TSS	Brain Angular Gyrus	brain
13	chr5:9543200-9547400	Active TSS	Right Ventricle	heart
14	chr5:9543200-9548200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr5:9543200-9548200	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr5:9543200-9548200	Active TSS	Right Atrium	heart
17	chr5:9543400-9544800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
18	chr5:9543400-9548000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr5:9543400-9548400	Active TSS	NHLF	lung
20	chr5:9543600-9544800	Active TSS	Rectal Smooth Muscle	rectum
21	chr5:9543600-9547200	Active TSS	Fetal Intestine Large	intestine
22	chr5:9543600-9548400	Active TSS	Rectal Mucosa Donor 29	rectum
23	chr5:9543800-9544800	Active TSS	Fetal Muscle Leg	muscle
24	chr5:9543800-9547800	Active TSS	Fetal Lung	lung
25	chr5:9543800-9548000	Active TSS	Fetal Heart	heart
26	chr5:9543800-9548200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr5:9543800-9548200	Active TSS	Fetal Kidney	kidney
28	chr5:9543800-9548600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr5:9543800-9548800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr5:9543800-9548800	Active TSS	Placenta Amnion	Placenta Amnion
31	chr5:9544000-9544800	Active TSS	HMEC	breast
32	chr5:9544000-9545200	Active TSS	Cortex derived primary cultured neurospheres	brain
33	chr5:9544000-9546000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
34	chr5:9544000-9546800	Active TSS	iPS-20b Cell Line	embryonic stem cell
35	chr5:9544200-9544800	Active TSS	HUES64 Cell Line	embryonic stem cell
36	chr5:9544200-9544800	Active TSS	Adipose Nuclei	Adipose
37	chr5:9544200-9544800	Active TSS	Colonic Mucosa	Colon
38	chr5:9544200-9544800	Active TSS	Fetal Brain Female	brain
39	chr5:9544200-9545000	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
40	chr5:9544200-9547000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
41	chr5:9544200-9547000	Bivalent/Poised TSS	Fetal Thymus	thymus
42	chr5:9544200-9547600	Active TSS	Rectal Mucosa Donor 31	rectum
43	chr5:9544200-9548000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr5:9544200-9548000	Active TSS	Ovary	ovary
45	chr5:9544200-9548400	Active TSS	NHDF-Ad	bronchial
46	chr5:9544400-9544800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr5:9544400-9544800	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
48	chr5:9544400-9544800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr5:9544400-9544800	Active TSS	Duodenum Mucosa	Duodenum
50	chr5:9544400-9544800	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle

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