The 2.0 version of rSNPBase

Variant report

Variant rs564143141
Chromosome Location chr22:33117114-33117115
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33111000-33118600 Weak transcription HSMMtube muscle
2 chr22:33112200-33121400 Enhancers Fetal Thymus thymus
3 chr22:33113000-33121600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr22:33113400-33120400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
5 chr22:33114200-33119400 Weak transcription Esophagus oesophagus
6 chr22:33114400-33119000 Weak transcription Small Intestine intestine
7 chr22:33114400-33119400 Weak transcription Left Ventricle heart
8 chr22:33114400-33121400 Weak transcription Colon Smooth Muscle Colon
9 chr22:33114600-33121800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr22:33115200-33117400 Enhancers Fetal Muscle Leg muscle
11 chr22:33115600-33119600 Enhancers Thymus Thymus
12 chr22:33115800-33117400 Enhancers Fetal Intestine Large intestine
13 chr22:33115800-33119400 Enhancers Dnd41 blood
14 chr22:33115800-33122200 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr22:33116000-33117600 Enhancers Fetal Intestine Small intestine
16 chr22:33116000-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr22:33116000-33119600 Enhancers Primary T cells from cord blood blood
18 chr22:33116200-33117400 Enhancers Primary hematopoietic stem cells blood
19 chr22:33116200-33117400 Enhancers Fetal Muscle Trunk muscle
20 chr22:33116200-33119400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr22:33116400-33117400 Enhancers Lung lung
22 chr22:33116400-33117400 Enhancers Skeletal Muscle Male skeletal muscle
23 chr22:33116400-33117400 Enhancers Spleen Spleen
24 chr22:33116400-33119600 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr22:33116400-33120400 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr22:33116400-33120600 Enhancers Primary T helper cells PMA-I stimulated --
27 chr22:33116600-33117200 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr22:33116600-33117200 Enhancers NH-A brain
29 chr22:33116600-33117400 Bivalent Enhancer Primary T cells fromperipheralblood blood
30 chr22:33116600-33117400 Enhancers Duodenum Mucosa Duodenum
31 chr22:33116600-33117400 Enhancers Pancreas Pancrea
32 chr22:33116600-33117400 Enhancers NHEK skin
33 chr22:33116600-33118000 Enhancers Primary T helper cells fromperipheralblood blood
34 chr22:33116600-33118000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr22:33116600-33120400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr22:33116600-33120400 Enhancers Osteobl bone
37 chr22:33116600-33120800 Enhancers Fetal Stomach stomach
38 chr22:33116800-33117200 Enhancers HUES6 Cell Line embryonic stem cell
39 chr22:33116800-33117200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr22:33116800-33117200 Enhancers Placenta Placenta
41 chr22:33116800-33117200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr22:33116800-33117200 Weak transcription Rectal Smooth Muscle rectum
43 chr22:33116800-33117200 Enhancers Stomach Mucosa stomach
44 chr22:33116800-33117200 Flanking Active TSS HepG2 liver
45 chr22:33116800-33117400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr22:33116800-33117400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr22:33116800-33117400 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr22:33116800-33117400 Enhancers Adipose Nuclei Adipose
49 chr22:33116800-33117400 Enhancers Fetal Lung lung
50 chr22:33116800-33117400 Enhancers Right Atrium heart

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Last update: Aug 31, 2015